Difference between revisions of "AHM2012-Slicer-Overview-and-Migration"

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  [[AHM_2012#Agenda|Back to AHM Schedule]]
 
  [[AHM_2012#Agenda|Back to AHM Schedule]]
  
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Five topics:
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'''Tuesday, January 10, 2012 8 to 10am'''
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# 20mins - Overview of Architecture
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This session is for all developers planning to migrate existing slicer3 modules to slicer4 or start a new project from scratch in slicer4.
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## Overview - Steve
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## Implementation - Jc
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# 10mins - CLI - Jim itk4,
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==Overview and Architecture==
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# 20mins - Loadable Module -J2
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* Steve (10 minutes) [[AHM2012-Slicer-Introduction|Introduction]]
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# 20mins - Scripted Modules & Python Console - Steve
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** Capabilities
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# 20mins - Testing Infrastructure - Benjamin
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** Release Schedule
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# 10min - Documentation - Jc
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** Goals
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# 20mins - Extensions - Jc
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** Ongoing Slicer4 projects and collaborations (NAC, NCIGT, CTK, Supplements...)
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* Jc (10 minutes)  [[AHM2012-Slicer-Architecture|Architecture]]
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** Modularization Object Specialization
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*** Qt Widgets <- CTK Widgets <- MRML Widgets <- Slicer Widgets
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*** vtkObject <- MRMLLogic <- Module Logic
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** Displayable Managers
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** Views and Layouts
 +
 
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== Module Creation and Migration ==
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* Steve (5 minutes) [https://www.slicer.org/wiki/Documentation/4.0/Developers/ModuleWizard Module Wizard]
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* Jim (10 minutes)
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** [[Media:Slicer4 CLI.ppt|CLI Modules]]
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** Creating a CLI from existing C++ code
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** Migrating CLI Modules to ITK version 4
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* J2: Loadable Modules [[File:LoadableModules.pptx]] (20 minutes)
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** Structure of a Loadable Module
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** Specialization of Module Classes
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** Integration with Designer
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* Steve:  [[AHM2012-Slicer-Python|Scripted Modules and Python Console]] (20 minutes)
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** What is accessible via python
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** Using the console (See [http://vimeo.com/33236047 J2's excellent demo video])
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** Writing a Scripted Module
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*** PythonQt interface
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*** Logic with vtk/vtkITK/CLI Modules
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*** Accessing MRML Data via numpy
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** Refining the code and UI with slicerrc
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** Limitations of python
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* Demian: [[Whole-Brain-Tractography-Wizard|Whole Brain Tractography]] (10 minutes)
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** Python wizard example
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** Discussion of interactions among modules
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** How to build on the dMRI module
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== Testing Infrastructure ==
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* Benjamin (20 minutes), [https://na-mic.org/w/images/e/ed/AHM-2012-SlicerTesting.pdf PDF]
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** What is QtTesting/How it work.
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** Tests for each widgets
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** Limits : RenderWindow and GUI Testing
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** Slicer integration [http://www.na-mic.org/Wiki/index.php/File:DemoTuto2Slicer.mpeg Demo]
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** What's next ?
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== Documentation ==
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* Jc (10 minutes) [[AHM2012-Slicer-Documentation|Documentation]]
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** How to write end user documentation for your module
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** Source code naming and documentation style
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** CMake documentaiton
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 +
== Extensions ==
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* Jc (20 minutes) [[AHM2012-Slicer-Extension|Extension]]
 +
** Writing an s4ext file
 +
** Testing your extension
 +
** How users will access your extension

Latest revision as of 18:27, 10 July 2017

Home < AHM2012-Slicer-Overview-and-Migration
Back to AHM Schedule

Tuesday, January 10, 2012 8 to 10am This session is for all developers planning to migrate existing slicer3 modules to slicer4 or start a new project from scratch in slicer4.


Overview and Architecture

  • Steve (10 minutes) Introduction
    • Capabilities
    • Release Schedule
    • Goals
    • Ongoing Slicer4 projects and collaborations (NAC, NCIGT, CTK, Supplements...)
  • Jc (10 minutes) Architecture
    • Modularization Object Specialization
      • Qt Widgets <- CTK Widgets <- MRML Widgets <- Slicer Widgets
      • vtkObject <- MRMLLogic <- Module Logic
    • Displayable Managers
    • Views and Layouts

Module Creation and Migration

  • Steve (5 minutes) Module Wizard
  • Jim (10 minutes)
    • CLI Modules
    • Creating a CLI from existing C++ code
    • Migrating CLI Modules to ITK version 4
  • J2: Loadable Modules File:LoadableModules.pptx (20 minutes)
    • Structure of a Loadable Module
    • Specialization of Module Classes
    • Integration with Designer
  • Steve: Scripted Modules and Python Console (20 minutes)
    • What is accessible via python
    • Using the console (See J2's excellent demo video)
    • Writing a Scripted Module
      • PythonQt interface
      • Logic with vtk/vtkITK/CLI Modules
      • Accessing MRML Data via numpy
    • Refining the code and UI with slicerrc
    • Limitations of python
  • Demian: Whole Brain Tractography (10 minutes)
    • Python wizard example
    • Discussion of interactions among modules
    • How to build on the dMRI module

Testing Infrastructure

  • Benjamin (20 minutes), PDF
    • What is QtTesting/How it work.
    • Tests for each widgets
    • Limits : RenderWindow and GUI Testing
    • Slicer integration Demo
    • What's next ?

Documentation

  • Jc (10 minutes) Documentation
    • How to write end user documentation for your module
    • Source code naming and documentation style
    • CMake documentaiton

Extensions

  • Jc (20 minutes) Extension
    • Writing an s4ext file
    • Testing your extension
    • How users will access your extension
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