AHM 2009

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Home < AHM 2009

Introduction

This is the home page for the 2009 NA-MIC all hands meeting (AHM). NA-MIC participants meet for a AHM once a year. The purpose of the AHM is to coordinate, discuss plans and report to NIH officers and the external advisory board (EAB). The external advisory board meets with the NA-MIC leadership immediately after the AHM. In parallel, NA-MIC is organizing a project week. These events, with the exception of the EAB meeting, are open to collaborators and potential collaborators.

For more information about the project weeks in general, click here.

For information about the January 2009 project week, see below or click here.

For information about Utah as a travel destination click here.

View of the City
SLC The 2009 AHM, EAB and Project Week will be held in Salt Lake City, UT, January 5-9 2009.

Agenda

(preliminary)

Time Monday, January 5 Tuesday, January 6 Wednesday, January 7 Thursday, January 8 Friday, January 9
Project Activities in Capitol B-C Project Activities in Capitol B-C Project Activities in Capitol B-C AHM in Capitol A-B, EAB in Olympus B

Project Activities in Olympus A

Project Activities in Capitol B-C
7:30-8:00 Breakfast Breakfast Breakfast Breakfast
8:00-10:00 9:30 Core 1 and 2 PI closed session in Capitol A Project Work
8:00-9:00 How to use NITRC and slicer(Steve, Terry)

9:00-10:00 Using Batchmake and XNAT to process large studies (Julien Jomier and Dan Marcus) in Amethyst 1

Project Work
8:00-9:00 Tutorial Review and Judging Amethyst 1 		8:00 Introduction, Ron Kikinis

8:05 NA-MIC Highlights (Ross Whitaker)
Roadmap Projects
8:35: JHU/Queens (Gabor Fichtinger)
8:55: UNC (Heather Cody)
9:15: PNL (Marek Kubicki)
9.35: Mind Institute (Jeremy Bockolt)

 Project Work
TBD
10:00-10:30 Core 1 and 2 PI closed session Coffee Coffee Coffee Coffee
10:30-12:00 Core 1 and 2 PI closed session Project Work Project Work

TBD

Collaborations
10:30: Iowa collaboration (Nicole Grosland)
10:45: Wake Forest collaboration (Chris Wyatt)
11:00: Georgetown U. collaboration (Kevin Cleary)
11:15: UNC collaboration (Dinggang Shen)
11:30: Mario Negri Collaboration (Luca Antiga)
11:45: Discussion

 Project Work
12:00-1:00 Lunch Lunch
Lunch
 Lunch Adjourn
1:00-3:00 Begin Project Activities: Introduce Projects and Participants DTI Discussion (Sonia, Randy, Others) Amethyst 1 Project Work
Python Modules (Luca Antiga)

Tools and Tutorials (coordinator)
1:00-1:20 Slicer (Steve Pieper)
1:20-1:40 Plug-ins for Slicer (Jim Miller)
1:40-2:00 Non-interactive tools (Stephen Aylward)
2:00-3:00 Tutorial Contest: Presentations by the winners (Randy Gollub)
3:00-3:30 Coffee Coffee Coffee Coffee
3:00-5:00 3:30-4:30 GUI Testing and Developing Test Modules for Slicer (Sebastien) Amethyst 1 3:30-4:30 Cell Segmentation (Alex G)
Project Work
TBD Amethyst 1 		Project Work
3:00-5:00 Meshing Tutorial (Nicole Grosland, Vincent Magnotta)
Iowa_Meshing_Tutorial
Amethyst 1 		EAB
Olympus B
3:00-4:00 Discussion with NA-MIC Leadership
4:00-5:00 Closed Session
05:00-07:00 05:00-06:00 Meshing Breakout 6:00 Optional: Beer at Murphy's (like last year)

Please note that there will be a Core 1&2 Site PI Retreat on the morning of Monday, January 5th. This is a closed session for Core 1&2 Site PIs, with no delegates. The topic is the competitive renewal.

Dates. Venue. Registration

Dates:

  • The All Hands Meeting and External Advisory Board Meeting will be held on Thursday, January 8th.
  • Project Activities will be held rest of the week between Monday, January 5th and Friday, January 9th.

Venue: The venue for the meeting is Marriot City Center, Salt Lake City, Utah Mariott City Center, Salt Lake City, Utah. (Floorplan). Please either call the hotel at 1-801-961-8700 or 1-866-961-8700 (toll free) or book online by December 4, 2008 using the code SCISCIA to get rooms at $139/night. Please note that we do need attendees to use this hotel in order to not incur additional charges for the use of conference rooms.

Registration: We are charging a registration fee to all participants ($200 for AHM only, and $450 for AHM+). The fee covers the costs of the facilities and food provided. In order to keep the fee low, we need to get a sufficient number of hotel nights by our participants. See above for more on this. Please click http://www.sci.utah.edu/namic2009/registration.html for online registration. This registration must be completed by December 12, 2008.

Connectivity We have three wireless access points at the AHM. Two of them are located in the capital ballroom. One is named capital-ballroom, the other is named capital-ballroom2. If one access point doesn't let you connect it is probably overloaded. In that case, please try connecting to the other one.

Attendees

Please follow http://www.sci.utah.edu/namic2009/registration.html to complete your online registration. The organizers will periodically publish the list of registered attendees in the space below. Attendees should NOT add their names in this section. This list is a snapshop as of 01:46, 23 December 2008 (UTC)

AHM ONLY

  1. Michael Ackerman National Library of Medicine at NIH
  2. Morry Blumenfeld EAB
  3. German Cavelier NIH-NIMH
  4. Gabor Fichtinger Queens Univ
  5. Heather Cody Hazlett University of North Carolina
  6. Mikhail Milchenko Washington University in St Louis
  7. Sandy Napel EAB
  8. Fred Prior EAB
  9. Nathan Wilson Cardiovascular Simulation, Inc.
  10. Chris Wyatt
  11. Dr. Terry S Yoo DHHSNIHNLM

Project Week and AHM

  1. Luca Antiga Mario Negri Institute
  2. Kevin Archie Washington University
  3. Nicole Aucoin BWH
  4. Stephen Aylward Kitware
  5. H Jeremy Bockholt The Mind Research Network
  6. Sylvain Bouix PNL
  7. Kiyoyuki Chinzei AIST
  8. Michal Depa MIT CSAIL
  9. Harish Doddi Stanford University
  10. Andriy Fedorov SPL-BWH
  11. Yi Gao
  12. arnaud gelas Harvard Medical School
  13. Guido Gerig SCI Institute
  14. Polina Golland MIT CSAIL
  15. Randy L. Gollub MGH
  16. Casey Goodlett SCI Institute
  17. alexandre gouaillard Harvard Medical School
  18. Sylvain Gouttard SCI Institute
  19. Jeffrey Grethe UC San Diego
  20. Nicole Grosland The University of Iowa
  21. Daniel Haehn SPL-BWH
  22. Nathan Hageman UCLA
  23. Nobuhiko Hata Brigham and Womens Hospital
  24. Kathryn Hayes Brigham and Womens Hospital
  25. Jaesung Hong Kyushu University
  26. Chris Johnson EAB
  27. Ron Kikinis SPL - BWH
  28. Ivan Kolesov Georgia Tech
  29. Marek Kubicki PNL_BWH
  30. Curtis Lisle KnowledgeVis, LLC
  31. Yanling Liu SAIC-Frederick, Inc.
  32. Zhexing Liu NIRAL, UNC
  33. Terry Lorber Isomics, Inc
  34. Bill Lorensen EAB
  35. Vincent Magnotta The University of Iowa
  36. Daniel Marcus Washington University
  37. Katie Mastrogiacomo SPL - BWH
  38. Cedric Mathieu UNC
  39. Bjoern Menze MIT CSAIL
  40. James Miller
  41. Vandana Mohan Georgia Inst of Technology
  42. kishore mosaliganti Harvard Medical School
  43. Marc Niethammer UNC Chapel Hill
  44. Guy Nir Technion
  45. Ipek Oguz UNC
  46. Saikat Pal Stanford University
  47. Steve Pieper Isomics, Inc.
  48. Marcel Prastawa SCI Institute
  49. Sonia Pujol Surgical Planning Lab, Brigham Womens Hosp
  50. Vidya Rajagopalan Virginia Tech
  51. Austin Ramme The University of Iowa
  52. Petter Risholm Brigham Womens Hospital
  53. James Ross SPL-BWH
  54. Marco Ruiz UCSD
  55. Raul San Jose LMI-BWH
  56. Peter Savadjiev Brigham Womens Hospital
  57. Mark Scully The Mind Research Network
  58. Madeleine Seeland LMI
  59. Gregory Sharp MGH
  60. Kiran Shivanna The University of Iowa
  61. Martin Styner University of North Carolina
  62. Xiaodong Tao GE Global Research
  63. Doug Terry Psychiatry Neuroimaging Lab
  64. Clement Vachet UNC
  65. Koen Van Leemput MIT CSAIL
  66. Archana Venkataraman MIT CSAIL
  67. Siddharth Vikal Queens University
  68. William Wells SPL-BWH
  69. Carl-Fredrik Westin Brigham and Womens Hospital
  70. Alexander Yarmarkovich Isomics
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