Difference between revisions of "CTSC:Slicer handson.022410"
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| − | + | Back to [[Collaboration:Harvard_CTSC|Collaboration:Harvard_CTSC]] | |
| + | <br> | ||
| − | + | =3D Slicer Medical Image Data Visualization Hands-On Workshop= | |
| − | |||
| − | |||
| − | + | <gallery> | |
| + | Image:Catalyst_logo_final.jpg|[http://catalyst.harvard.edu Harvard CTSC] | ||
| + | Image:NAMIC 380x463.jpg|[http://www.na-mic.org National Alliance for Medical Image Computing] | ||
| + | Image:Nac.png|[http://nac.spl.harvard.edu/ Neuroimage Analysis Center] | ||
| + | </gallery> | ||
| − | + | == Syllabus == | |
| − | * | + | The purpose of this tutorial is to provide the members of the research community with a practical experience of the capabilities of the Open Source 3D Slicer software platform. The curriculum is '''hands-on''' which means that participants will have access to computers. |
| − | * | + | The course is divided into two sections: |
| − | + | * an introduction on the concepts of Slicer and 3D visualization. | |
| + | * a demonstration on how to use Slicer to generate quantitative image biomarkers from FDG-PET/CT (pre/post-therapy whole-body imaging with SUV quantification) | ||
| − | + | ==Target Audience== | |
| + | Radiology Residents and Fellows and Translational Clinical Scientists who are interested in medical image computing | ||
| − | + | == Learning Objectives == | |
| − | + | The learning objectives of the workshop are (a) to enhance interpretation of DICOM images through the use of 3D visualization, (b) to gain experience with interactive assessment of complex anatomical structures (c) to present current directions of open-source computer graphics applications in Radiology such as generation of quantitative imaging biomarkers for FDG-PET/CT. After completion of the workshop, participants will be able to visualize and analyze their own datasets within the 3D Slicer platform. | |
| − | + | ||
| − | ** | + | == Course Faculty == |
| − | * | + | * Valerie Humblet, Ph.D. Harvard Catalyst, The Harvard CTSA, Harvard Medical School, Boston, MA |
| − | ** | + | * Wendy Plesniak, Ph.D., Surgical Planning Laboratory, Harvard Medical School, Department of Radiology, Brigham and Women's Hospital, Boston, MA |
| + | |||
| + | == Logistics and Registration == | ||
| + | *Date: Wednesday February 24, 2010 | ||
| + | *Time: 12-1 pm | ||
| + | *Location: Countway Library (room 403), Harvard Medical School, 10 Shattuck Street, Boston | ||
| + | *Contact for registration: e-mail [mailto:Image_consult@catalyst.harvard.edu Valerie Humblet] | ||
| + | |||
| + | == Slides and Datasets == | ||
| + | |||
| + | * Tutorial Slides: | ||
| + | [[media:Tutorial022410.ppt | Slicer tutorial slides]] | ||
| + | |||
| + | * Tutorial Data: | ||
| + | |||
| + | http://wiki.na-mic.org/Wiki/images/5/51/Slicer3MinuteDataset.zip <br> | ||
| + | http://wiki.na-mic.org/Wiki/images/7/73/PETCTFusion-Tutorial-Data.zip | ||
| + | |||
| + | * Tutorial Software (for PC only): | ||
| + | |||
| + | http://www.na-mic.org/Slicer/Download/Snapshots/win32/Slicer3-3.5-RSNA-2009-11-06-win32.exe | ||
| + | |||
| + | * More Information: | ||
| + | |||
| + | http://www.slicer.org | ||
Latest revision as of 02:29, 24 February 2010
Home < CTSC:Slicer handson.022410Back to Collaboration:Harvard_CTSC
Contents
3D Slicer Medical Image Data Visualization Hands-On Workshop
Syllabus
The purpose of this tutorial is to provide the members of the research community with a practical experience of the capabilities of the Open Source 3D Slicer software platform. The curriculum is hands-on which means that participants will have access to computers. The course is divided into two sections:
- an introduction on the concepts of Slicer and 3D visualization.
- a demonstration on how to use Slicer to generate quantitative image biomarkers from FDG-PET/CT (pre/post-therapy whole-body imaging with SUV quantification)
Target Audience
Radiology Residents and Fellows and Translational Clinical Scientists who are interested in medical image computing
Learning Objectives
The learning objectives of the workshop are (a) to enhance interpretation of DICOM images through the use of 3D visualization, (b) to gain experience with interactive assessment of complex anatomical structures (c) to present current directions of open-source computer graphics applications in Radiology such as generation of quantitative imaging biomarkers for FDG-PET/CT. After completion of the workshop, participants will be able to visualize and analyze their own datasets within the 3D Slicer platform.
Course Faculty
- Valerie Humblet, Ph.D. Harvard Catalyst, The Harvard CTSA, Harvard Medical School, Boston, MA
- Wendy Plesniak, Ph.D., Surgical Planning Laboratory, Harvard Medical School, Department of Radiology, Brigham and Women's Hospital, Boston, MA
Logistics and Registration
- Date: Wednesday February 24, 2010
- Time: 12-1 pm
- Location: Countway Library (room 403), Harvard Medical School, 10 Shattuck Street, Boston
- Contact for registration: e-mail Valerie Humblet
Slides and Datasets
- Tutorial Slides:
- Tutorial Data:
http://wiki.na-mic.org/Wiki/images/5/51/Slicer3MinuteDataset.zip
http://wiki.na-mic.org/Wiki/images/7/73/PETCTFusion-Tutorial-Data.zip
- Tutorial Software (for PC only):
http://www.na-mic.org/Slicer/Download/Snapshots/win32/Slicer3-3.5-RSNA-2009-11-06-win32.exe
- More Information:
