Difference between revisions of "DBP3:Utah:SlicerModulePVAntrumCut"
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| − | === | + | ===CMR Toolkit PV Antrum Cut Filter=== |
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| − | |[[Image: | + | |[[Image:PVAntrumCutFilter.jpg|thumb|280px|(Clockwise from top right) LA Wall Layer, LA Endo Layer, and LA Endo Layer with Pulmonary Veins Removed]] |
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Type: CLI | Type: CLI | ||
| − | Category: | + | Category: Cardiac MRI Toolkit |
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==Module Description== | ==Module Description== | ||
| − | This module creates a cardiac MRI segmentation mask called the | + | This module creates a cardiac MRI segmentation mask called the PV Antrum Cut mask by removing the pulmonary veins (PVs) from the left atrium (LA) segmentation. The inputs are the LA endocardial segmentation and the LA endocardial wall segmentation. The output mask represents the entire LA endocardial layer minus the PVs. This mask can be used to calculate the early diastolic (peak) volume of the LA. |
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===Examples, Use Cases & Tutorials=== | ===Examples, Use Cases & Tutorials=== | ||
* This module is meant to be used for removing the PV regions from the LA endocardial segmentation. | * This module is meant to be used for removing the PV regions from the LA endocardial segmentation. | ||
| − | * [[Media: | + | * [[Media:Carma_PVAntrumCutFilter_Tutorial_New.pptx|CARMA PV Antrum Cut Filter Tutorial]] |
===Quick Tour of Features and Use=== | ===Quick Tour of Features and Use=== | ||
| − | The following are the inputs and outputs | + | The following are the inputs and outputs: |
| − | + | * Endo Layer : Select the LA endocardial segmentation label mask | |
| − | * Endo Layer : Select the LA endocardial segmentation | + | * Wall Layer : Select the LA wall segmentation label mask |
| − | * Wall Layer : Select the LA wall segmentation | + | * Endo Layer No Veins: The output label mask |
| − | * Endo Layer No Veins: The output mask | ||
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== Development == | == Development == | ||
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===Source code & documentation=== | ===Source code & documentation=== | ||
| − | + | The source code for this module can be found at the [https://github.com/carma-center/carma_slicer_extension/ GitHub repository]. | |
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Latest revision as of 19:54, 29 July 2013
Home < DBP3:Utah:SlicerModulePVAntrumCutCMR Toolkit PV Antrum Cut Filter
Authors, Collaborators & Contact
- CARMA Center, University of Utah: Alan Morris, Salma Bengali, Greg Gardner, Josh Cates, Rob MacLeod
General Information
Module Type & Category
Type: CLI
Category: Cardiac MRI Toolkit
Module Description
This module creates a cardiac MRI segmentation mask called the PV Antrum Cut mask by removing the pulmonary veins (PVs) from the left atrium (LA) segmentation. The inputs are the LA endocardial segmentation and the LA endocardial wall segmentation. The output mask represents the entire LA endocardial layer minus the PVs. This mask can be used to calculate the early diastolic (peak) volume of the LA.
Usage
Examples, Use Cases & Tutorials
- This module is meant to be used for removing the PV regions from the LA endocardial segmentation.
- CARMA PV Antrum Cut Filter Tutorial
Quick Tour of Features and Use
The following are the inputs and outputs:
- Endo Layer : Select the LA endocardial segmentation label mask
- Wall Layer : Select the LA wall segmentation label mask
- Endo Layer No Veins: The output label mask
Development
Source code & documentation
The source code for this module can be found at the GitHub repository.
