DTI Tractography Challenge MICCAI2011 Submission Format

File format and naming convention for submission

The results should be sent in a zip archive or tarball file named 'miccai2011DTIChallenge_firstAuthorName.zip'. For each case, the results should be submitted in the following formats: 1) 3D coordinate of the tracts: vtkPolydata ASCII VTK file format; 2) enveloppe of the tracts (voxelized binary image of the tracts): ITK-readable Nrrd file format 3) anatomical views (axial, coronal, sagittal) of individual and paired corticospinal tracts with a black background, in png file format, 4) a set of intuitive neurosurgical views in png file format.

All results (Nrrd and vtk files) should be in the original DWI image space.

An example of the naming convention to be used for Patient1 and HealthySubject1 is given below:

• Patient1:

patient1_left_tract.vtk
patient1_right_tract.vtk
patient1_left_enveloppe.nhdr
patient1_left_enveloppe.raw
patient1_right_enveloppe.nhdr
patient1_right_enveloppe.raw

patient1_left_tract_axial_view.png
patient1_left_tract_coronal_view.png
patient1_left_tract_sagittal_view.png
patient1_right_tract_axial_view.png
patient1_right_tract_coronal_view.png
patient1_right_tract_sagittal_view.png

patient1_left_and_right_tract_axial_view.png
patient1_left_and_right_tract_coronal_view.png
patient1_left_and_right_tract_sagittal_view.png

patient1_neurosurgicalview1.png

patient1_neurosurgicalviewN.png

• Healthy subject1

healthysubject1_scan1_left_tract.vtk
healthysubject1_scan1_right_tract.vtk
...
healthysubject1_scan10_left_tract.vtk
healthysubject1_scan10_right_tract.vtk
healthysubject1_scan1_left_enveloppe.nhdr
healthysubject1_scan1_left_enveloppe.raw
...
healthysubject1_scan10_left_enveloppe.nhdr
healthysubject1_scan10_left_enveloppe.raw
healthysubject1_scan1_right_enveloppe.nhdr
healthysubject1_scan1_right_enveloppe.raw
...
healthysubject1_scan10_right_enveloppe.nhdr
healthysubject1_scan10_right_enveloppe.raw

healthysubject1_scan1_left_tract_axial_view.png
healthysubject1_scan1_left_tract_coronal_view.png
healthysubject1_scan1_left_tract_sagittal_view.png
healthysubject1_scan1_right_tract_axial_view.png
healthysubject1_scan1_right_tract_coronal_view.png
healthysubject1_scan1_right_tract_sagittal_view.png
...
healthysubject1_scan10_left_tract_axial_view.png
healthysubject1_scan10_left_tract_coronal_view.png
healthysubject1_scan10_left_tract_sagittal_view.png
healthysubject1_scan10_right_tract_axial_view.png
healthysubject1_scan10_right_tract_coronal_view.png
healthysubject1_scan10_right_tract_sagittal_view.png

Back to DTI Tractography Challenge MICCAI 2011