Difference between revisions of "Event:2011-04-UtahDBP-Training"

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=Slicer Hands-on Training for the Afib Team=
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=Slicer Hands-on Training for the UTAH CARMA Team=
 
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== Logistics ==
  
 
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*Date: Friday, April 22, 2011.
== Logistics ==
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*Location: SCI Institute and CARMA center, Salt Lake City, Utah
<big><big>This is a hands-on tutorial. You need a good laptop and you need to pre-install data and software. See below for more information.</big></big>
 
*Date: Friday, April 22nd 2011
 
*Location: XXX, Sci Institute, Salt Lake City, Utah
 
  
 
== Agenda ==
 
== Agenda ==
* 9-9.30 Setup for those who had trouble with the installation
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* 09.30-11.00 Slicer tutorial for the Afib project (Ron Kikinis) and review of current Afib processing:Warnock Engineering Building Room 2570D, the Bioengineering Conference Room. See [[DBP3:Utah:RegSegPipeline|here]] for a review of some of the existing technology in Slicer 3.
* 9.30-10.30 [http://www.na-mic.org/Wiki/images/d/d4/Combined-RSNA2010-CTSA.ppt Combined tutorial slides (ppt) ]:
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* 11.00-11.15 Break and Transfer to the CARMA Center
**Slicer3 Minute tutorial
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* 11.15-12.30 Private meeting with DBP engineers about image processing for Afib in Slicer: discuss strategy for integrating new capabilities into Slicer (Dillon Lee, Josh Cates, Josh B., Allen Butler, Alan Morris, Danny Perry, Greg Gardner, Rob MacLeod).
**Quantitative Measurement of Volumetric Change: ChangeTracker Tutorial
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* 12:30-1:45 Lunch
**Quantitative Measurements for Functional Imaging: PETCTFusion Tutorial
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* 2:00 SCI Distinguished Seminar Series Lecture: Rai Winslow, Warnock Engineering Building (Room TBD).
**Please download the [[media:Slicer_data-RSNA2010-CTSA.zip | RSNA 2010 CTSA tutorial data ]] in preparation for the workshop.
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* 3:00 Leave for airport
*10.30-10.45 Break
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  [[Events#2011|Back to Events 2011]]
*10.45-12.00 Interactive editor, DTI visualization
 
**Please download the [[media:Case-040-NeurofMRI-WithTransforms.zip| NeurofMRI Case 40]] in preparation for the workshop.
 
*12.00-13.00 Lunch
 
*13.00 IGT
 
**Demo of the OpenIGTLink simulator.
 
**How to connect your tracker to Slicer
 
**[http://www.slicer.org/slicerWiki/images/b/bc/OpenIGTLinkTutorial_Slicer3.6.2_JunichiTokuda_Dec2010.ppt OpenIGTLink Tutorial slides (ppt)].
 
**[http://wiki.slicer.org/slicerWiki/index.php/Modules:OpenIGTLinkIF-3.6-Simulators Link to the OpenIGTLink Data simulator].
 
 
 
== Teaching Faculty==
 
*[http://www.spl.harvard.edu/pages/People/kikinis Ron Kikinis, M.D.], Surgical Planning Laboratory, Brigham and Women's Hospital, Harvard Medical School
 
 
 
== Registration ==
 
To sign-up for this event, please fill in the [[media:RegistrationForm_SlicerWorkshop_Dundee_Dec6_2010.doc | registration form]] send it by e-mail to Sonia Pujol, PhD [spujol at bwh.harvard.edu].
 
 
 
== Preparation for the Workshop ==
 
 
 
<span style="background-color: yellow"> The workshop combines oral presentations and instructor-led hands-on sessions with the participants working on their own laptop computers.
 
All participants are required to come with their own laptop computer and install the software and datasets prior to the event.</span>. A minimum of 2 GB of RAM (4 GB if possible) and a dedicated graphic accelerator with 256MB of on-board graphic memory (512MB is better) are required.  
 
 
 
Please install the '''Slicer3.6.2-2010-12-03 Nightly build version'''  appropriate to the laptop computer you'll be bringing to the tutorial:
 
 
 
* [http://www.na-mic.org/Slicer/Download/Nightly/Slicer3-3.6.3-beta-2010-12-03-win32.exe '''Windows''' (Slicer3-3.6.2-2010-12-03-win32.exe)]
 
* [[media:Slicer3-3.6.3-beta-2010-12-03-linux-x86_64.tar.gz‎ | '''Linux 64''' (Slicer3-3.6.2-2010-12-03-linux-x86_64.tar.gz)]]
 
* [[media:Slicer3-3.6.3-beta-2010-12-03-linux-x86.tar.gz‎ | '''Linux 32''' (Slicer3-3.6.2-2010-12-03-linux-x86.tar.gz)]]
 
* [[media:Slicer3-3.6.3-beta-2010-12-03-darwin-x86.tar.gz‎  | '''Mac Darwin''' (Slicer3-3.6.2-2010-12-03-darwin-x86.tar.gz)]]
 
 
 
Please download the [[media:Slicer_data-RSNA2010-CTSA.zip | RSNA 2010 CTSA tutorial data ]] in preparation for the workshop.
 
 
 
== Slicer3 Training Survey ==
 
[http://www.surveymonkey.com/s/GZDXKXQ Please click here to take the Slicer3 Training Survey] 
 
 
 
== Slicer Community ==
 
Participants are invited to join the [http://www.slicer.org/pages/Mailinglist Slicer user and Slicer developer community]  for questions and feature requests related to the software.
 
  [[Events#2010|Back to Events 2010]]
 

Latest revision as of 20:20, 9 August 2011

Home < Event:2011-04-UtahDBP-Training

Slicer Hands-on Training for the UTAH CARMA Team

SCI-UTAH.png
NAMIC.jpg Logo nac.gif NCIGTlogo.gif

Logistics

  • Date: Friday, April 22, 2011.
  • Location: SCI Institute and CARMA center, Salt Lake City, Utah

Agenda

  • 09.30-11.00 Slicer tutorial for the Afib project (Ron Kikinis) and review of current Afib processing:Warnock Engineering Building Room 2570D, the Bioengineering Conference Room. See here for a review of some of the existing technology in Slicer 3.
  • 11.00-11.15 Break and Transfer to the CARMA Center
  • 11.15-12.30 Private meeting with DBP engineers about image processing for Afib in Slicer: discuss strategy for integrating new capabilities into Slicer (Dillon Lee, Josh Cates, Josh B., Allen Butler, Alan Morris, Danny Perry, Greg Gardner, Rob MacLeod).
  • 12:30-1:45 Lunch
  • 2:00 SCI Distinguished Seminar Series Lecture: Rai Winslow, Warnock Engineering Building (Room TBD).
  • 3:00 Leave for airport
Back to Events 2011