Difference between revisions of "IGT:ToolKit"

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='''Tutorials'''=
 
='''Tutorials'''=
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=Training Compendium=
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{| border="1" cellpadding="5"
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|- style="background:#BBE9E2; color:black" align="left"
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| style="width:5%" | '''Level'''
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| style="width:35%" | '''Tutorial'''
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| style="width:30%" | '''Sample Data'''
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| style="width:10%" | '''Image'''
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|-
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| style="background:#9BF2C5; color:black" align="Center"| '''1'''
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| style="background:#D1FFF9; color:black"| [[Media:Slicer3Training_LoadingAndVisualization.ppt| Data Loading and Visualization in Slicer3 ]]
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| style="background:#D1FFF9; color:black"| [http://www.na-mic.org/Wiki/index.php/Image:SlicerSampleVisualization.tar.gz SlicerSampleVisualization.tar.gz]
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| style="background:#C3D1C3; color:black" align="Center"| [[Image:SceneRestore.png|100px|LoadingandVisualization]]
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|-
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| style="background:#9BF2C5; color:black" align="Center"| '''1'''
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| style="background:#D1FFF9; color:black"| [[Media:NAMIC-AHM07-EMTutorialV2.ppt|Basic EM Segmentation]]
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| style="background:#D1FFF9; color:black"| [[Media:EMSegTutorial-AHM2008.zip|EMSegTutorial-AHM2008.zip]]
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| style="background:#C3D1C3; color:black" align="Center"| [[Image:EMSegment.png|100px|EM Segmenter]]
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|-
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| style="background:#8EDEB5; color:black" align="Center"| '''2'''
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| style="background:#D1FFF9; color:black"| [[Media:EMSegTutorial-AHM2008.ppt|EM Advanced Course]]
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'''Mini-tutorials:''' [[EMSegmenter Mini-Tutorials]]
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| style="background:#D1FFF9; color:black"| [[Media:EMSegTutorial-AHM2008.zip|EMSegTutorial-AHM2008.zip]]
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| style="background:#C3D1C3; color:black" align="Center"| [[Image:EMlowres.png|100px|EM Segmenter]]
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|-
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| style="background:#8EDEB5; color:black" align="Center"| '''2'''
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| style="background:#D1FFF9; color:black"| [[media:Slicer3CourseForDevelopers SPujol.ppt|Slicer3 Course for Developers]]
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This tutorial is intended for engineers and scientists who want to to integrate external programs with Slicer3.
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| style="background:#D1FFF9; color:black"| [[Media:HelloWorld.zip|HelloWorld.zip]]
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| style="background:#C3D1C3; color:black" align="Center"| [[Image:HelloWorld.png|100px|Plug-In]]
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|}
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;[http://wiki.na-mic.org/Wiki/index.php/Slicer3:Training Slicer3 Training]
 
;[http://wiki.na-mic.org/Wiki/index.php/Slicer3:Training Slicer3 Training]

Revision as of 02:43, 3 June 2008

Home < IGT:ToolKit

The wiki pages here present the tool kit we are using or developing at Brigham and Women's Hospital for the purpose of image guided therapy (IGT). The IGT kit is a set of open source software tools with supported hardware devices. We encourage you download and use the free tools if you find them useful to you and welcome any comments or feedback from your experience


Slicer 3 for IGT

Install Slicer3
Sample data

Tutorials

Training Compendium

Level Tutorial Sample Data Image
1 Data Loading and Visualization in Slicer3 SlicerSampleVisualization.tar.gz LoadingandVisualization
1 Basic EM Segmentation EMSegTutorial-AHM2008.zip EM Segmenter
2 EM Advanced Course

Mini-tutorials: EMSegmenter Mini-Tutorials

EMSegTutorial-AHM2008.zip EM Segmenter
2 Slicer3 Course for Developers

This tutorial is intended for engineers and scientists who want to to integrate external programs with Slicer3.

HelloWorld.zip Plug-In



Slicer3 Training
Navigation Tutorial

Tutorial includes installation of Open IGT Link module. Tracking emulator is provided in place of actual tracking device. No tracking device needed for this tutorial.

Neurosurgical Planning as an Example of IGT in Slicer3


Advanced Tutorial

Navigation with tracking device

Tutorial with a tracking device. IGSTK installation required.

Example projects

Volume rendering with Real-time Imaging

Anatomy of IGT Tool Kit

Core Open Source Software and Protocol

Slicer IGT
Open IGT Link

Optional Open Source Tool Kit

IGSTK, an interface to commercial IGT tracking device
Robot Control Toolkit, an interface to surgical robots


Contact Info

If you have any comments or requests, please contact Dr. Nobuhiko Hata at: hata {at-mark} bwh.harvard.edu. Dr. Hata leads the development of Slicer IGT at National Center for Image Guided Therapy.