Difference between revisions of "Import/Export Farsight-GoFigure results"

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==Key Investigators==
 
==Key Investigators==
 
* Harvard Medical School: Lydie Souhait, Arnaud Gelas, Sean Megason
 
* Harvard Medical School: Lydie Souhait, Arnaud Gelas, Sean Megason
* RPI: Badri Roysam
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* RPI: Kedar Grama, Raghav Padmanabhan, Badri Roysam
  
 
==Project==
 
==Project==
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* Discuss current status of both projects
 
* Discuss current status of both projects
 
* Define common objects/traces used by both projects
 
* Define common objects/traces used by both projects
 +
* Install both projects
 
* Export the data from both projects into textfiles
 
* Export the data from both projects into textfiles
 
* Import the data from Farsight into Gofigure Database
 
* Import the data from Farsight into Gofigure Database
* Find a way to import the data from Gofigure into Farsight
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* Import the data from Gofigure Database into Farsight
  
 
</div>
 
</div>
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<h3>Progress</h3>
 
<h3>Progress</h3>
* Export Contours from Gofigure2 into textfile done
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* Export Contours/Meshes from Gofigure2 into textfile done
* Import Contours from textfile into Gofigure2 database done
+
* Import Contours/Meshes from textfile into Gofigure2 database done
 +
* Import segmentation results from Farsight into Gofigurew done
 +
* Import results from Gofigure2 into Farsight ~75% done  
 
</div>
 
</div>
 
</div>
 
</div>
 +
 +
http://github.com/arnaudgelas/SegmentationToGoFigure2
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<div style="width: 97%; float: left;">
 
<div style="width: 97%; float: left;">

Latest revision as of 14:12, 25 June 2010

Home < Import < Export Farsight-GoFigure results

Key Investigators

  • Harvard Medical School: Lydie Souhait, Arnaud Gelas, Sean Megason
  • RPI: Kedar Grama, Raghav Padmanabhan, Badri Roysam

Project

Objective

  • Exchange data (cell segmentation results) between Farsight and Gofigure2

Approach, Plan

  • Discuss current status of both projects
  • Define common objects/traces used by both projects
  • Install both projects
  • Export the data from both projects into textfiles
  • Import the data from Farsight into Gofigure Database
  • Import the data from Gofigure Database into Farsight

Progress

  • Export Contours/Meshes from Gofigure2 into textfile done
  • Import Contours/Meshes from textfile into Gofigure2 database done
  • Import segmentation results from Farsight into Gofigurew done
  • Import results from Gofigure2 into Farsight ~75% done

http://github.com/arnaudgelas/SegmentationToGoFigure2