Difference between revisions of "Slicer3:ColorsFiducialsFreesurferModelmaker"

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(Apr 2007 update)
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== 2007 AHM Project Half Week ==
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<big>'''Note:''' We are migrating this content to the slicer.org domain - <font color="orange">The newer page is [https://www.slicer.org/wiki/Slicer3:ColorsFiducialsFreesurferModelmaker  here]</font></big>
 
 
* [[Media:2007_Project_Half_Week_Slicer3Colors.ppt | 4 block:Colors]]
 
* [[Media:2007_Project_Half_Week_Slicer3Fiducials.ppt | 4 block:Fiducials]]
 
* [[Media:2007_Project_Half_Week_Slicer3FreeSurfer.ppt | 4 block:FreeSurfer]]
 
* [[Media:2007_Project_Half_Week_Slicer3ModelMaker.ppt | 4 block:ModelMaker]]
 
 
 
== Colors ==
 
 
 
* MRML Color nodes implemented
 
* basic module UI done, display colours with scalar id, names, color box
 
* incorporated color node selector in volumes and models GUIs
 
* FreeSurfer default Heat, Green/Red look up tables are supported, as well as reading in default labels and annotation labels, and loading color tables from annotation files.
 
* Procedural color nodes expanded, support for vtkColorTransferFunction as well as vtkLookupTable in the viewer widget.
 
* Scalar overlays supported in the Models GUI, Display tab.
 
* '''TO DO''': continue work on UI
 
 
 
== Fiducials ==
 
 
 
* MRML Node for list implemented, GUI for module refined
 
* vtkGlyphSource2D subclassed for Slicer, StarBurst option integrated
 
* vtkSlicerGlyphSource2D usable in both the main viewer and in 2D slices
 
* S. Pieper linked 2D and 3D fiducials
 
* '''TO DO''': debug 3D glyphs for the 3D window, add picking in the 3D window
 
 
 
== FreeSurfer ==
 
 
 
* MGH ITK Reader ported from NAMIC Sandbox, works as any other volume reader now
 
* Slicer 2.x source code ported as a Slicer 3 Library, used in Query Atlas scripts
 
* FreeSurfer .W surfaces and CURV surfaces are loadable through the Models GUI
 
* FreeSurfer scalar overlays are loadable via the Models Display GUI
 
* '''TODO''': other volume format support through the GUI instead of just scriptable, integrate FSLookupTable with the MRML Color Nodes
 
 
 
== ModelMaker ==
 
 
 
* Implemented as a Command Line Module
 
* '''TODO''': link in the vtkMRMLColorNode classes to name models
 

Latest revision as of 18:07, 10 July 2017

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