Slicer3:ColorsFiducialsFreesurferModelmaker

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Colors

  • MRML Color nodes implemented, basic module UI done, incorporated as a node selector in volumes
  • TO DO: expand UI, support FreeSurfer Color Lookup Tables, incorporate as a node selector in models

Fiducials

  • MRML Node for list implemented, GUI for module refined
  • vtkGlyphSource2D subclassed for Slicer, StarBurst option integrated
  • vtkSlicerGlyphSource2D usable in both the main viewer and in 2D slices
  • S. Pieper linked 2D and 3D fiducials
  • TO DO: debug 3D glyphs for the 3D window, add picking in the 3D window

FreeSurfer

  • MGH ITK Reader ported from NAMIC Sandbox, works as any other volume reader now
  • Slicer 2.x source code ported as a Slicer 3 Library, used in Query Atlas scripts
  • FreeSurfer .W surfaces and CURV surfaces are loadable through the Models GUI
  • FreeSurfer scalar overlays are loadable via the Models Display GUI
  • TODO: other volume format support through the GUI instead of just scriptable, integrate FSLookupTable with the MRML Color Nodes

ModelMaker

  • Implemented as a Command Line Module
  • TODO: link in the vtkMRMLColorNode classes to name models