Training:2010tutorialcontest

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Summer 2010 Project Week Panel

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Link to tutorials

Tutorial Name Slicer 3.6 Platform Slicer License Contact Info Tutorial Template followed Additional Directions Clear? Primary Reviewer Secondary Reviewer Luis CF Steve Sonia Marc Randy Total
Fiducials yes linux64, windows yes yes yes yes Luis Randy
RSS (Robust Statistics Segmenter) yes linux64&32, windows, mac yes yes yes yes Steve Luis
Automatic SPHARM Shape Analysis in 3D Slicer yes linux yes yes yes yes Randy CF Missing underlying algorithm info, makes too many assumptions about what user knows, needs more educational content, harmonize style, better clinical goal statement
Atlas Label Fusion & Surface Registration yes linux64, mac yes yes yes yes CF Marc Nice instructions how to get started (get slicer, get data). Tutorial format well explained. Slice 8: Beautiful overview of algorithmic strategy and its mapping to modules involved. Smooth and well put together, a candidate for the winning tutorial.
Stochastic Tractography yes linux64, (mac) yes yes yes yes Sonia Steve
Robot-assisted MRI-guided prostate biopsy yes windows, (mac) yes yes yes yes Steve Sonia
GAMBIT: Group-wise Automatic Mesh-Based analysis of cortIcal Thickness yes linux yes yes yes yes Randy CF Seems very nice, but "The executable “ShapeWorksRun” needs to be copied to the

“GAMBIT_Executables_1.0” folder" seems complicated, and I cannot find this script in the downloaded "Shape works" directory, only a set of windows ext files there.||||||||||

White Matter Lesion Segmentation yes linux64&32 yes yes yes yes Luis Marc
Image-overlay Guided Needle Insertion yes windows yes yes yes yes Sonia Steve
Fluid Mechanics Tractography yes, but as a trunk build in NAMIC sandbox mac yes yes yes yes CF Sonia Slide 4: First link broken (how to download slicer 3.6), and the pointer to the data set is hidden in another tutorial, without an explicit link to that tutorial. Slide 5: "To get the module code: Download the experimental branch, Slicer3.6- hagemanFMTractography, from the Slicer 3 svn and run getbuildtest.tcl script" but no instruction how to get to that svn, or how to run svn.
End to End Meshing Workflow yes linux64&32, mac yes yes yes yes Marc Randy
Longitudinal Lesion Comparison yes linux64&32, mac yes yes yes yes Marc Luis