Difference between revisions of "UNC ARCTIC Tutorial"
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Following thoss tutorials, you will be able to perform an individual analysis of regional cortical thickness. | Following thoss tutorials, you will be able to perform an individual analysis of regional cortical thickness. | ||
In the ARCTIC tutorial, you will learn how to load input volumes, run the end-to-end module ARCTIC to generate cortical thickness information and display output volumes. | In the ARCTIC tutorial, you will learn how to load input volumes, run the end-to-end module ARCTIC to generate cortical thickness information and display output volumes. | ||
| − | And in the UNC external modules, you will be able to run the UNC external modules within Slicer3 | + | And in the UNC external modules, you will be able to run the UNC external modules within Slicer3 in order to perform a regional cortical thickness analysis step by step. |
Revision as of 23:24, 6 January 2009
Home < UNC ARCTIC TutorialContents
ARCTIC (Automatic Regional Cortical ThICkness) Slicer3 Tutorial
Overview
Following thoss tutorials, you will be able to perform an individual analysis of regional cortical thickness. In the ARCTIC tutorial, you will learn how to load input volumes, run the end-to-end module ARCTIC to generate cortical thickness information and display output volumes. And in the UNC external modules, you will be able to run the UNC external modules within Slicer3 in order to perform a regional cortical thickness analysis step by step.
Roadmap project : http://www.na-mic.org/Wiki/index.php/DBP2:UNC:Regional_Cortical_Thickness_Pipeline
Tutorial
Software
• Slicer3 http://www.slicer.org/pages/Downloads
• BatchMake http://www.batchmake.org/batchmake/resources/software.html
Tutorial materials
• BatchMake wrapper (ARCTIC_BatchMake_Wrapper_1.0)
• Tutorial dataset(ARCTIC_Tutorial_example_1.0)
• External modules (ARCTIC_Executables_1.0)
• Pediatric atlas (UNC_Pediatric_Brain_Atlas)
People
Cedric Mathieu
Clement Vachet
Martin Styner
Heather Cody Hazlett
