Difference between revisions of "User:Davisb"

From NAMIC Wiki
Jump to: navigation, search
 
 
(16 intermediate revisions by the same user not shown)
Line 3: Line 3:
 
==Rule Based Segmentation==
 
==Rule Based Segmentation==
  
 +
===Status summary===
 +
Code is debugged, wrapper works
 +
 +
itk tests work; fixed vtk wrapper; added mask code to vtk wrapper; vtk tests work
 +
 +
===How to build module===
 
*get cvs copy of slicer2
 
*get cvs copy of slicer2
 
**Scripts/genlib.tcl
 
**Scripts/genlib.tcl
Line 13: Line 19:
 
**Scripts/genlib.tcl
 
**Scripts/genlib.tcl
  
Problems:
+
===Problems===
  
*Build fails
+
*[fixed]Build fails---updated name in cmakelists
 +
*[now working] vtk test does not work---subtle templating error (false assumption) in itk code
 +
*images must be flipped between vtk reader/writers and itk pipeline (how many dimensions?)
 +
*there was a problem with readers and writers for unsigned long data type, changed to unsigned short

Latest revision as of 23:26, 6 May 2007

Current Projects

Rule Based Segmentation

Status summary

Code is debugged, wrapper works

itk tests work; fixed vtk wrapper; added mask code to vtk wrapper; vtk tests work

How to build module

  • get cvs copy of slicer2
    • Scripts/genlib.tcl
    • Scripts/cmaker.tcl
  • get svn copy of NAMICSandbox
  • create a link to the RuleBasedSegmentation module within slicer2
cd slicer2/Modules
ln -s NAMICSandbox/RuleBasedSegmentation/vtkRuleBasedSegmentation vtkRuleBasedSegmentation
  • compile slicer2 with RuleBasedSegmentation module
    • Scripts/genlib.tcl

Problems

  • [fixed]Build fails---updated name in cmakelists
  • [now working] vtk test does not work---subtle templating error (false assumption) in itk code
  • images must be flipped between vtk reader/writers and itk pipeline (how many dimensions?)
  • there was a problem with readers and writers for unsigned long data type, changed to unsigned short