Difference between revisions of "IGT:ToolKit/Neurosurgical-Planning"
From NAMIC Wiki
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| − | + | [[Image:NeurosurgicalPlanningOverview.png|300px|thumb]] | |
| − | [[ | + | Back to [[IGT:ToolKit|IGT:ToolKit]] |
| − | + | =Neurosurgical Planning for Image Guided Therapy using Slicer3= | |
| − | + | ==Overview== | |
| − | + | This tutorial reviews Slicer3's Image Guided Therapy capabilities using the example of preoperative planning for neurosurgery. It covers how to perform multiple tasks in Slicer3, including: | |
| + | * Image registration | ||
| + | * Segmentation and model making | ||
| + | * Diffusion Tensor Imaging and tractography | ||
| + | * Using an atlas | ||
| − | [[Media:ImageGuidedTherapyPlanning.pdf | Tutorial slides]] | + | ==Tutorial Materials== |
| + | * [[Media:ImageGuidedTherapyPlanning.pdf|Tutorial slides]] for the Neurosurgical Planning Tutorial | ||
| + | * [[Media:PatientDataset.tgz | Patient dataset]] | ||
| + | * SPL-PNL brain atlas - download the .zip file from [http://www.na-mic.org/pages/Special:PubDB_View?dspaceid=1265 here] | ||
| + | * [[Media:AnatomicalMRIRegisteredToAtlas.mrml | MRML scene registering the patient with the atlas]] (right-click to save) | ||
| + | * [[Media:AnatomicalMRIRegisteredToDTI.mrml | MRML scene registering the patient's anatomical MRI with the patient's DTI]] (right-click to save) | ||
| + | |||
| + | ==Software Installation Instructions== | ||
| + | Go to the [http://wiki.na-mic.org/Wiki/index.php/IGT:ToolKit/Install-Slicer3 Slicer3 Install] site. | ||
| + | |||
| + | ==People== | ||
| + | * [http://www.spl.harvard.edu/pages/People/dpace Danielle Pace] | ||
| + | * [http://www.spl.harvard.edu/pages/People/noby Nobuhiko Hata] | ||
Revision as of 04:05, 5 June 2008
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Contents
Neurosurgical Planning for Image Guided Therapy using Slicer3
Overview
This tutorial reviews Slicer3's Image Guided Therapy capabilities using the example of preoperative planning for neurosurgery. It covers how to perform multiple tasks in Slicer3, including:
- Image registration
- Segmentation and model making
- Diffusion Tensor Imaging and tractography
- Using an atlas
Tutorial Materials
- Tutorial slides for the Neurosurgical Planning Tutorial
- Patient dataset
- SPL-PNL brain atlas - download the .zip file from here
- MRML scene registering the patient with the atlas (right-click to save)
- MRML scene registering the patient's anatomical MRI with the patient's DTI (right-click to save)
Software Installation Instructions
Go to the Slicer3 Install site.
