User contributions
From NAMIC Wiki
- 21:35, 15 October 2010 diff hist 0 File:Slicer3PythonITK.png uploaded a new version of "File:Slicer3PythonITK.png": Reverted to version as of 20:53, 15 October 2010
- 21:34, 15 October 2010 diff hist 0 File:Slicer3PythonITK.png uploaded a new version of "File:Slicer3PythonITK.png"
- 20:58, 15 October 2010 diff hist +430 Slicer3WrapITKPython
- 20:53, 15 October 2010 diff hist 0 N File:Slicer3PythonITK.png
- 20:52, 15 October 2010 diff hist +1,126 Slicer3WrapITKPython
- 19:54, 15 October 2010 diff hist +5 User:Inorton →Other Notes
- 19:54, 15 October 2010 diff hist +17 Slicer3WrapITKPython
- 19:54, 15 October 2010 diff hist +418 N Slicer3WrapITKPython Created page with 'The recommended ITK wrapping To build Slicer3 with Python ITK wrapping, made the following changes: Edit /Slicer3/SuperBuild/External_Insight.cmake In the section CMAKE_ARGS, a…'
- 19:44, 15 October 2010 diff hist +120 User:Inorton/Slicer3SuperBuildWindows7
- 19:43, 15 October 2010 diff hist +164 User:Inorton/Slicer3SuperBuildWindows7
- 19:36, 15 October 2010 diff hist +1,641 N User:Inorton/Slicer3SuperBuildWindows7 Created page with '*install CMake from here: *install msysGit from here: http://code.google.com/p/msysgit/ *install SlikSVN from here: http://www.sliksvn.com/en/download *install WinCVS from here:…'
- 18:48, 15 October 2010 diff hist +5 m User:Inorton →Other Notes
- 18:46, 15 October 2010 diff hist +56 User:Inorton →Other Notes
- 17:43, 15 October 2010 diff hist +44 m User:Inorton →Other Notes
- 17:42, 15 October 2010 diff hist -12 m User:Inorton →Other Notes
- 14:58, 15 October 2010 diff hist +39 m User:Inorton →Other Notes
- 14:57, 15 October 2010 diff hist -115 m User:Inorton
- 22:16, 4 October 2010 diff hist +66 User:Inorton →Feature Wishes
- 22:12, 4 October 2010 diff hist +98 User:Inorton →Feature Wishes
- 22:33, 28 September 2010 diff hist +1,634 Nm ImageConversionUtilities Created page with 'Medical images are stored in a number of different formats, and must be converted to allow use on each analysis platform and viewing system. There is no magic tool available, so …'
- 22:33, 28 September 2010 diff hist +30 m User:Inorton →Other Notes
- 22:32, 28 September 2010 diff hist -2 m User:Inorton
- 22:31, 28 September 2010 diff hist +2,057 Nm LoadfMRIIntoInstaTrak Created page with '0. Overview 0.1 Requirements 1. Run agconvert to overlay images 2. Modify patient names for unique files. 4. Load data into InstaTrak '''0) Overview''' This process is us…'
- 22:30, 28 September 2010 diff hist +27 m User:Inorton →Other Notes
- 22:22, 28 September 2010 diff hist +775 Nm LoadAnalyzeIntoBrainLab Created page with 'Two requirements: 1) reslice the thresholded blobs into the reference image space (use the image which the fMRI was processed against). In SPM: "Coregister", choose "Reslice Onl…'
- 22:21, 28 September 2010 diff hist +29 m User:Inorton →Other Notes
- 22:20, 28 September 2010 diff hist +437 Nm Tidbits Created page with 'To run EMSegmenter from the command line: ./Slicer3-build/lib/Slicer3/Plugins/EMSegmentCommandLine --mrmlSceneFileName ../EMSegmenterT1Example/EMSeg-Brain-MRT1.mrml --targetVolum…'
- 22:20, 28 September 2010 diff hist +13 m User:Inorton →Other Notes
- 22:19, 28 September 2010 diff hist +64 m CTPhantomSegmentation
- 22:18, 28 September 2010 diff hist 0 N File:Inorton Phantom SS4.png current
- 22:18, 28 September 2010 diff hist 0 N File:Inorton Phantom SS3.png current
- 22:18, 28 September 2010 diff hist 0 N File:Inorton Phantom SS2.png current
- 22:17, 28 September 2010 diff hist 0 N File:Inorton Phantom SS1.png current
- 22:16, 28 September 2010 diff hist +2,175 Nm CTPhantomSegmentation Created page with 'We scanned a phantom (plastic skull) in a water bag with contrast agent mixed into water. This gives the outline of the skull as dark, whereas the water enhances. In order to be …'
- 22:16, 28 September 2010 diff hist +27 m User:Inorton →Other Notes
- 22:15, 28 September 2010 diff hist +2,063 N LinuxScreenCaptureMovieNotes Created page with 'To create the Slicer demo videos, used gtk-recordmydesktop (ubuntu package will pull the full reqs). Set video to 100% quality. Under Preferences, set appropriate frames per seco…'
- 22:14, 28 September 2010 diff hist +34 User:Inorton →Other Notes
- 22:13, 28 September 2010 diff hist -105 ExternalConnectionsToSPL
- 22:11, 28 September 2010 diff hist +3,089 N ExternalConnectionsToSPL Created page with 'Access to Golby lab servers from outside the SPL network requires: 1) Account on SPL network 1a) List of "s/keys" for the account - single-use passwords to be used when connecti…'
- 22:11, 28 September 2010 diff hist +30 User:Inorton →Other Notes
- 22:04, 28 September 2010 diff hist +1,245 N UseIntelMKLwithMatlabForFasterSPM Created page with '1) Download and install Intel MKL (academic version is free) 2) cd to the following directory (default is: /opt/intel/mkl/10.*.*.*/) /opt/intel/mkl/10.*.*.*/tools/builder…'
- 21:45, 28 September 2010 diff hist +39 User:Inorton →Other Notes
- 21:43, 28 September 2010 diff hist +21 User:Inorton
- 20:42, 21 September 2010 diff hist +91 NAMIC Wiki:DTI:DICOM for DWI and DTI →Update September 2010
- 20:37, 21 September 2010 diff hist +745 User:Inorton
- 16:09, 20 September 2010 diff hist +31 NAMIC Wiki:DTI:DICOM for DWI and DTI →Related Links
- 16:08, 20 September 2010 diff hist +56 NAMIC Wiki:DTI:DICOM for DWI and DTI →Related Links
- 13:42, 20 September 2010 diff hist +2 NAMIC Wiki:DTI:DICOM for DWI and DTI →Related Links
- 13:42, 20 September 2010 diff hist +90 NAMIC Wiki:DTI:DICOM for DWI and DTI →Related Links
- 13:32, 20 September 2010 diff hist +1 NAMIC Wiki:DTI:DICOM for DWI and DTI →Related Links
- 13:32, 20 September 2010 diff hist +145 NAMIC Wiki:DTI:DICOM for DWI and DTI
- 19:49, 16 September 2010 diff hist -2 User:Inorton
- 19:42, 16 September 2010 diff hist -4 User:Inorton
- 19:42, 16 September 2010 diff hist +12 User:Inorton
- 19:41, 16 September 2010 diff hist -11 User:Inorton
- 19:40, 16 September 2010 diff hist +2 User:Inorton
- 19:40, 16 September 2010 diff hist +47 User:Inorton
- 19:40, 16 September 2010 diff hist +2 User:Inorton
- 19:39, 16 September 2010 diff hist +34 User:Inorton
- 19:39, 16 September 2010 diff hist +167 N User:Inorton Created page with 'I work with NA-MIC through the Department of Neurosurgery at Brigham & Women's Hospital in collaboration with the Surgical Planning Lab in the Department of Radiology.'
- 02:33, 2 July 2010 diff hist +75 IGT:ToolKit/Neurosurgical-Planning current
- 14:06, 25 June 2010 diff hist +72 2010 Summer Project Week BrainLab Aurora Hybrid Navigation current
- 14:05, 25 June 2010 diff hist +165 2010 Summer Project Week BrainLab Aurora Hybrid Navigation
- 13:24, 25 June 2010 diff hist +25 2010 Summer Project Week BrainLab Aurora Hybrid Navigation
- 13:23, 25 June 2010 diff hist +112 2010 Summer Project Week BrainLab Aurora Hybrid Navigation
- 13:18, 25 June 2010 diff hist +33 2010 Summer Project Week BrainLab Aurora Hybrid Navigation
- 02:52, 21 June 2010 diff hist +8 2010 Summer Project Week Breakout Session:OpenIGTLink
- 18:10, 9 June 2010 diff hist +298 2010 Summer Project Week BrainLab Aurora Hybrid Navigation
- 18:01, 9 June 2010 diff hist +1,404 N 2010 Summer Project Week BrainLab Aurora Hybrid Navigation Created page with '__NOTOC__ <gallery> Image:PW-MIT2010.png|Projects List </gallery> ==Key Investigators== * BWH: Isaiah Norton, Noby Hata * Washington Univer…'
- 17:31, 9 June 2010 diff hist +82 2010 Summer Project Week
- 21:56, 18 May 2010 diff hist +44 2010 Summer Project Week
- 19:41, 7 January 2010 diff hist 0 File:NeurosurgicalPlanningTutorialData.zip uploaded a new version of "File:NeurosurgicalPlanningTutorialData.zip" current
- 19:39, 7 January 2010 diff hist 0 File:ImageGuidedTherapyPlanning.ppt uploaded a new version of "File:ImageGuidedTherapyPlanning.ppt"
- 19:38, 7 January 2010 diff hist 0 File:ImageGuidedTherapyPlanning.pdf uploaded a new version of "File:ImageGuidedTherapyPlanning.pdf"
- 16:40, 28 October 2009 diff hist 0 File:ImageGuidedTherapyPlanning.pdf uploaded a new version of "File:ImageGuidedTherapyPlanning.pdf"
- 16:39, 28 October 2009 diff hist 0 File:ImageGuidedTherapyPlanning.pdf uploaded a new version of "File:ImageGuidedTherapyPlanning.pdf": Reverted to version as of 15:00, 25 August 2009
- 16:38, 28 October 2009 diff hist 0 File:ImageGuidedTherapyPlanning.pdf uploaded a new version of "File:ImageGuidedTherapyPlanning.pdf"
- 16:35, 28 October 2009 diff hist 0 File:ImageGuidedTherapyPlanning.ppt uploaded a new version of "File:ImageGuidedTherapyPlanning.ppt"
- 15:00, 25 August 2009 diff hist 0 File:ImageGuidedTherapyPlanning.ppt uploaded a new version of "File:ImageGuidedTherapyPlanning.ppt"
- 15:00, 25 August 2009 diff hist 0 File:ImageGuidedTherapyPlanning.pdf uploaded a new version of "File:ImageGuidedTherapyPlanning.pdf"
- 20:59, 21 August 2009 diff hist 0 File:ImageGuidedTherapyPlanning.ppt uploaded a new version of "File:ImageGuidedTherapyPlanning.ppt"
- 20:59, 21 August 2009 diff hist 0 File:ImageGuidedTherapyPlanning.pdf uploaded a new version of "File:ImageGuidedTherapyPlanning.pdf"
- 04:16, 12 December 2008 diff hist +26 2008 IGT Project Week Tractography for Neurosurgery: Workflow feedback current
- 04:13, 12 December 2008 diff hist 0 m 2008 IGT Project Week Tractography for Neurosurgery: Workflow feedback
- 04:12, 12 December 2008 diff hist +2 2008 IGT Project Week Tractography for Neurosurgery: Workflow feedback
- 04:12, 12 December 2008 diff hist +654 2008 IGT Project Week Tractography for Neurosurgery: Workflow feedback
- 13:43, 11 December 2008 diff hist +134 2008 IGT Project Week Tractography for Neurosurgery: Workflow feedback
- 15:38, 8 December 2008 diff hist +1 2008 IGT Project Week
- 15:37, 8 December 2008 diff hist +1 2008 IGT Project Week
- 15:35, 8 December 2008 diff hist +84 N 2008 IGT Project Week Realtime Tractography for Neurosurgery Workflow 2008 IGT Project Week Realtime Tractography for Neurosurgery Workflow moved to 2008 IGT Project Week Tractography for Neurosurgery: Workflow feedback current
- 15:35, 8 December 2008 diff hist 0 m 2008 IGT Project Week Tractography for Neurosurgery: Workflow feedback 2008 IGT Project Week Realtime Tractography for Neurosurgery Workflow moved to 2008 IGT Project Week Tractography for Neurosurgery: Workflow feedback
- 15:28, 8 December 2008 diff hist +5 2008 IGT Project Week Tractography for Neurosurgery: Workflow feedback
- 15:27, 8 December 2008 diff hist +240 2008 IGT Project Week Tractography for Neurosurgery: Workflow feedback
- 14:57, 8 December 2008 diff hist +64 2008 IGT Project Week Tractography for Neurosurgery: Workflow feedback
- 19:48, 5 December 2008 diff hist +138 2008 IGT Project Week Tractography for Neurosurgery: Workflow feedback
- 17:49, 4 December 2008 diff hist +219 2008 IGT Project Week Tractography for Neurosurgery: Workflow feedback
- 17:34, 4 December 2008 diff hist +38 2008 IGT Project Week Tractography for Neurosurgery: Workflow feedback
- 02:55, 4 December 2008 diff hist +12 2008 IGT Project Week
- 22:27, 25 August 2008 diff hist +1 Talk:Slicer3.2:Training current
- 22:26, 25 August 2008 diff hist +547 N Talk:Slicer3.2:Training New page: Images in "Tutorial 1.4" (DTI) seen only to be viewable on Mac. Starting from Page 9 there is an error message for some images when viewing on Windows (Vista) and Linux (OO.org). The error...