2014 Summer Project Week
Dates: June 23-27, 2014.
Location: MIT, Cambridge, MA.
Agenda
Time | Monday, June 23 | Tuesday, June 24 | Wednesday, June 25 | Thursday, June 26 | Friday, June 27 |
---|---|---|---|---|---|
Project Presentations | NA-MIC Update Day | IGT and RT Day | Reporting Day | ||
8:30am | Breakfast | Breakfast | Breakfast | Breakfast | |
9am-12pm | 10-12pm Breakout Session: DICOM (Steve Pieper) |
9:30-11am: Breakout Session: Registration Algorithms(Sandy Wells) |
9:30-10:30am Tutorial Contest Presentations |
10am-12pm: Project Progress Updates | |
12pm-1pm | Lunch | Lunch | Lunch | Lunch | Lunch boxes; Adjourn by 1:30pm |
1pm-5:30pm | 1-1:05pm: Ron Kikinis: Welcome
Grier Rooms
|
1-3pm: Breakout Session: QIICR (Andrey Fedorov) |
1-3pm: Breakout Session: Image-Guided Therapy - Prostate Interventions (Clare Tempany, Tina Kapur)
|
||
5:30pm | Adjourn for the day | Adjourn for the day | Adjourn for the day | Adjourn for the day |
Background
Project Week is a hands on activity -- programming using the open source NA-MIC Kit, algorithm design, and clinical application -- that has become one of the major events in the NA-MIC, NCIGT, and NAC calendars. It is held in the summer at MIT, typically the last week of June, and a shorter version is held in Salt Lake City in the winter, typically the second week of January.
Active preparation begins 6-8 weeks prior to the meeting, when a kick-off teleconference is hosted by the NA-MIC Engineering, Dissemination, and Leadership teams, the primary hosts of this event. Invitations to this call are sent to all NA-MIC members, past attendees of the event, as well as any parties who have expressed an interest in working with NA-MIC. The main goal of the kick-off call is to get an idea of which groups/projects will be active at the upcoming event, and to ensure that there is sufficient NA-MIC coverage for all. Subsequent teleconferences allow the hosts to finalize the project teams, consolidate any common components, and identify topics that should be discussed in breakout sessions. In the final days leading upto the meeting, all project teams are asked to fill in a template page on this wiki that describes the objectives and plan of their projects.
The event itself starts off with a short presentation by each project team, driven using their previously created description, and allows all participants to be acquainted with others who are doing similar work. In the rest of the week, about half the time is spent in breakout discussions on topics of common interest of subsets of the attendees, and the other half is spent in project teams, doing hands-on programming, algorithm design, or clinical application of NA-MIC kit tools. The hands-on activities are done in 10-20 small teams of size 3-5, each with a mix of experts in NA-MIC kit software, algorithms, and clinical. To facilitate this work, a large room is setup with several tables, with internet and power access, and each team gathers on a table with their individual laptops, connects to the internet to download their software and data, and is able to work on their projects. On the last day of the event, a closing presentation session is held in which each project team presents a summary of what they accomplished during the week.
A summary of all past NA-MIC Project Events is available here.
Please make sure that you are on the na-mic-project-week mailing list
Projects
TBI
Atrial Fibrillation
Huntington's Disease
Head and Neck Cancer
Slicer4 Extensions
Cardiac
Stroke
Brain Segmentation
Image-Guided Therapy
- SlicerIGT extension: testing, tutorials, website (Tamas Ungi)
- Gestural Point of Care Interface for IGT (Saskia, Franklin, Tobias)
- MR-Ultrasound Registration for Prostate Interventions (Chenxi Zhang, Andriy Fedorov, Andras)
- Surface approximation from contour points (Chenxi Zhang, Csaba Pinter, Andrey Fedorov)
- Steered image registration using intelligent interfaces for minimal user interaction (Marcel Prastawa, Jim Miller, Steve Pieper)
Radiation Therapy
TMJ-OA
Chronic Obstructive Pulmonary Disease
QIICR
- Real world value mapping support (Andrey, Andras, Steve, Jim, ...)
- Segmentation object support (Andrey, Csaba, Steve, ...)
Infrastructure
- Chronicle (Steve Pieper)
- Volume Registration (Steve Pieper)
- OpenCL (Steve Pieper, Marcel Prastawa)
- Markups (Nicole Aucoin)
- Pluggable Label Statistics (Andrey , Ethan, Steve, Brad?, Jim? Dirk?)
Feature Extraction
- Breast Tumor Segmentation and Heterogeneity Analysis (Vivek Narayan, Jay Jagadeesan)
- Quantitative image feature extraction in Non-Small Cell Lung Cancer (Hugo Aerts)
Other
- Shape Analysis for the developing murine skull (Murat Maga, Ryan Young, Seattle Chidren's Hospital).
Logistics
- Dates: June 23-27, 2014.
- Location: Stata Center / RLE MIT.
- REGISTRATION: https://www.regonline.com/namic2014summerprojectweek. Please note that as you proceed to the checkout portion of the registration process, RegOnline will offer you a chance to opt into a free trial of ACTIVEAdvantage -- click on "No thanks" in order to finish your Project Week registration.
- Registration Fee: $300.
- Hotel: Similar to previous years, no rooms have been blocked in a particular hotel.
- Room sharing: If interested, add your name to the list before May 27th. See here
Registrants
Do not add your name to this list - it is maintained by the organizers based on your paid registration. (Please click here to register.)
- Hugo Aerts, Dana Farber/Harvard, hugo_aerts@dfci.harvard.edu
- Peter Anderson, retired, traneus@verizon.net
- Jean-Christophe Fillion-Robin, Kitware, jchris.fillionr@kitware.com
- Siqi Liu, University of Sydney, sliu4512@uni.sydney.edu.au
- Steve Pieper, Isomics Inc, pieper@isomics.com
- Fan Zhang, University of Sydney, fzha8048@uni.sydney.edu.au