Difference between revisions of "Collaboration:Harvard CTSC"

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__NOTOC__
 
__NOTOC__
−
=Harvard CTSC Translational Technologies Imaging Consortium Workspace=
+
=Harvard Catalyst | The Harvard Clinical and Translational Science Center, Imaging Consortium Workspace=
 +
 
 +
Welcome to this on-line archive of current and past HMS affiliated medical imaging activity! The original intent of these wiki pages was to encourage quick and efficient communication among the Harvard Catalyst Imaging Consortium and the broader Harvard Catalyst community.  However, changes in the structure of support for imaging in the Harvard Catalyst has resulted in new leadership and new offerings.  Please visit the main web page for the current organization: [http://catalyst.harvard.edu/ Harvard Catalyst].  This site is being maintained for archival purposes and also for support of the still active [[CTSC:ARRA_supplement| '''(mi2b2)''']] project.
 +
 
 
<gallery>
 
<gallery>
−
Image:Catalyst_logo_final.jpg|[http://catalyst.harvard.edu Harvard CTSC]
+
Image:Catalyst_logo_final.jpg
−
Image:NCRR-logo.jpg| [http://www.ncrr.nih.gov NCRR]
+
Image:NCRR-logo.jpg
−
Image:Harvard shield.jpg|[http://www.harvard.edu Harvard University]
+
Image:Harvard shield.jpg
 
</gallery>
 
</gallery>
  
−
=Mission Statement=
+
== Mission statement==
−
*Provide expert [http://catalyst.harvard.edu/services/imagingconsulting.html '''consultation'''] and guidance to the CTSC participants in the use of imaging as part of clinical translational research.
+
 
−
*Educate and advise about available imaging and image processing capabilities in the Harvard environment.
+
The [http://catalyst.harvard.edu/programs/imaging/ '''Imaging Consortium''']:
 +
* provides expert [http://catalyst.harvard.edu/services/imagingconsult/ '''consultation'''] to assist clinical and translational investigators in the planning and design of medical imaging research.  
 +
* [[CTSC:education| '''educates''']] about both general and current state of the art medical imaging and image processing capabilities. The courses are designed to better acquaint clinicians and scientists with the tools and technologies available in this important field.
 +
* guides the CTSC participants about available [[CTSC:resources| '''resources''']] in the use of imaging as part of clinical translational research.
 +
* develops, through the Harvard Catalyst Medical Imaging Informatics Bench to Bedside Initiative [[CTSC:ARRA_supplement| '''(mi2b2)''']] and cross-institutional harmonization efforts, medical imaging informatics to support the clinical and translational research community and enable current and future large-scale medical image data exploration.
 +
 
 +
 
 +
 
 +
----
  
−
=Key Personnel and Resources=
+
==Key Personnel==
−
{| border="1" cellpadding="5" style="margin: 1em auto 1em auto" border="1"
+
{| class="wikitable1" border="1" cellpadding="5" border="1" align="center"
−
| style="width:20%" | '''Sites'''
+
| style="width:30%" | '''Sites'''
−
| style="width:50%" | '''Imaging Consortium Role'''
+
| style="width:70%" | '''Imaging Consortium Personnel'''  
−
| style="width:30%" | '''Medical Image Acquisition,<br> Analysis and Visualization'''  
 
 
|-
 
|-
 
|[[Image:MGH.png|160px]]
 
|[[Image:MGH.png|160px]]
−
|'''Bruce Rosen''', Director <br>[[User:Randy |'''Randy Gollub''']], Co-Director <br>'''Gordon J. Harris''', Consultant <br> '''William Hanlon''', Consultant
+
|'''[http://www.nmr.mgh.harvard.edu/martinos/people/showPerson.php?people_id=141 Bruce Rosen]''', Director <br>[[User:Randy |'''Randy Gollub''']], Co-Director <br>'''[http://www2.massgeneral.org/radiology/index.asp?page=staff&subpage=harris Gordon J. Harris]''', Consultant <br> '''[http://connects.catalyst.harvard.edu/profiles/profile/person/73215 William Hanlon]''', Consultant
−
| [[CTSC:MGHresources|MGH Imaging Resources]]
 
 
|-
 
|-
 
|[[Image:BIDMC.png|160px]]
 
|[[Image:BIDMC.png|160px]]
−
|'''Robert Lenkinski''', Consultant <br>'''Neil Rofsky''', Consultant
+
|'''Valerie Humblet''', Medical Imaging Liaison<br>
−
| [[CTSC:BIDresources|BIDMC Imaging Resources]]
 
 
|-
 
|-
 
|[[Image:BWH.png‎|160px]]
 
|[[Image:BWH.png‎|160px]]
−
|'''[http://www.spl.harvard.edu/~ctempany Clare Tempany]''', Consultant<br>'''[http://spl.harvard.edu/~kikinis Ron Kikinis]''', Consultant<br>'''[http://cni.bwh.harvard.edu/personnel/charles.html Charles Guttmann]''', Consultant <br>'''Todd Perlstein''', Consultant <br>  '''Gordon Williams''', PI for CTSC Translational Technologies
+
|'''[http://www.spl.harvard.edu/~ctempany Clare Tempany]''', Consultant<br>'''[http://spl.harvard.edu/~kikinis Ron Kikinis]''', Consultant<br>'''[http://cni.bwh.harvard.edu/personnel/charles.html Charles Guttmann]''', Consultant <br>'''[http://connects.catalyst.harvard.edu/profiles/profile/person/21262 Todd Perlstein]''', Consultant <br>  '''[http://www.brighamandwomens.org/endocrine/Research/Gordon_Williams.aspx Gordon Williams]''', PI for CTSC Translational Technologies
−
| [[CTSC:BWHresources|BWH Imaging Resources]]
 
 
|-
 
|-
 
|[[Image:Children's.png|160px]]
 
|[[Image:Children's.png|160px]]
−
|'''Stephan Voss''', Consultant<br>'''Simon Warfield''', Consultant
+
|'''[http://www.childrenshospital.org/cfapps/research/data_admin/Site190/mainpageS190P0.html Stephan Voss]''', Consultant<br>'''[http://www.crl.med.harvard.edu/people/warfield/ Simon Warfield]''', Consultant
−
| [[CTSC:CHBresources|CHB Imaging Resources]]
 
 
|-
 
|-
 
|[[Image:DFCI.png‎|160px]]
 
|[[Image:DFCI.png‎|160px]]
−
|'''Annick D. Van den Abbeele''',Consultant<br>'''Jeff Yap''', Consultant and Director of Education
+
|'''[http://physicians.dana-farber.org/directory/profile.asp?dbase=main&setsize=10&last=Van+Den+Abbeele&grouptype_typeid=1&display=Y&nxtfmt=pc&pgt=Annick+D.+Van+den+Abbeele%2C+MD&gs=pc&pict_id=8172418 Annick D. Van den Abbeele]''',Consultant<br>'''[http://www.jpnm.org/faculty/yap.html Jeffrey Yap]''', Consultant and Director of Education
−
| [[CTSC:DFCIresources|DFCI Imaging Resources]]
 
 
|-
 
|-
−
|align="center"|[[Image:Catalyst_logo_final.jpg|160px]]
+
 
−
|'''Valerie Humblet''', Medical Imaging Liaison<br>'''Yong Gao''', Imaging Informatics Architect
 
−
|
 
 
|}
 
|}
  
  
−
= Harvard Catalyst Medical Imaging Informatics ARRA Administrative Supplement=
+
----
 +
 
 +
==Upcoming Events==
 +
 
 +
 
 +
 
 +
 
 +
----
 +
 
 +
== Multicenter Clinical Trial working group==
 +
 
 +
The objective of this group is the establishment of an infrastructure to support multi-center imaging projects.
 +
 
 +
*[[CTSC:multicenter101410| October 14, 2010]]
 +
*[[CTSC:multicenter061510| June 15, 2010]]
 +
*[[CTSC:multicenter042110| April 21, 2010]]
 +
 
  
−
On September 24, 2009, The Catalyst was awarded an [[CTSC:ARRA_supplement|ARRA administrative supplement]] to to enable clinical imaging data to be used for secondary research purposes.
+
----
  
−
<br>
+
==Harvard Catalyst Medical Imaging Informatics mi2b2 initiative==
 +
On September 24, 2009, Harvard Catalyst was awarded an [[CTSC:ARRA_supplement|ARRA administrative supplement]] to enable clinical imaging data to be used for secondary research purposes.
  
−
= Medical Imaging Education and Training=
 
  
−
Here you can find a list of [[CTSC:education_training|education resources]] available at the different participating institutions.
 
  
 +
----
  
−
= Upcoming Events =
+
== Medical Imaging Informatics and Data Management==
  
−
=== Education ===
+
[[CTSC:CrossSiteImagingIdeas|Use Cases and Development of Goals]]
  
−
* Thursday November 5, 2009 Introduction to Imaging, [http://catalyst.harvard.edu/services/clinicalInvestigationcrs.html Introduction to Clinical Investigation], Harvard Medical School.
 
−
* Monday November 30, 2009 3D Interactive Visualization of DICOM Images with Slicer, RSNA 2009 meeting (11/29-12/04/09), Chicago, IL
 
−
* Tuesday December 1, 2009 [[CTSC:RSNA 12/01/09| Quantitative Medical Imaging for Clinical Research and Practice]] RSNA 2009 meeting (11/29-12/04/09), Chicago, IL. Workshop in collaboration with Duke University and Johns Hopkins.
 
  
−
===Weekly Teleconference Calls===
 
−
Tuesday (9:00- 10:00 AM), call: 1-866-890-3820
 
  
−
*[[CTSC:TTIC.101309| October 13, 2009]]
+
----
−
*[[CTSC:TTIC.102009| October 20, 2009]]
 
−
*[[CTSC:TTIC.102709| October 27, 2009]]
 
  
−
=Past Events =
+
==MRI Compatible Physiological Monitoring System ==
−
===2009 presentations===
+
Here you can find [[CTSC:monitoring.system|Information for users]] about the specifications of a monitoring system supported by Harvard Catalyst. There is also information about the LabChart software.
−
* July 20, 2009: [[2009 Presentations | BWH BRI Research Connection LIVE lunch]]
 
−
* June 2, 2009: [[2009 Presentations | BIDMC Radiology Staff Meeting]]
 
−
* May 19, 2009: [[2009 Presentations|MGH Martinos Center Staff Meeting]]
 
−
* April 28, 2009: [[2009 Presentations|MGH Pediatric Unit Chiefs Meeting]]
 
−
* April 14, 2009: [[2009 Presentations|BWH Clinical Investigation Committee]]
 
−
* April 9, 2009: [[2009 Presentations|BWH Radiology Section Heads (abdominal)]]
 
−
* April 9, 2009: [[2009 Presentations| MGH Radiology Staff Meeting]]
 
−
* April 6, 2009: [[2009 Presentations|MGH Research Council]]
 
−
* February 27, 2009: [[2009 Presentations|Radiology Staff Meeting]], BWH
 
−
* February 2009: [[2009 Presentations|Radiology Staff Meeting]], Children's Hospital
 
  
−
===2009 t-con===
 
  
−
*[[CTSC:TTIC.092909| September 29, 2009]]
+
----
−
*[[CTSC:TTIC.092209| September 22, 2009]]
 
−
*[[CTSC:TTIC.091509| September 15, 2009]] Mini-retreat 9-11 am, Ballard Room (Countway 5th floor)
 
−
*September 8, 2009 Meeting canceled
 
−
*[[CTSC:TTIC.090109| September 1, 2009]]
 
−
*August 25, 2009 Meeting canceled
 
−
*[[CTSC:TTIC.081809| August 18, 2009]]
 
−
*[[CTSC:TTIC.081109| August 11, 2009]]
 
−
*[[CTSC:TTIC.080409| August 4, 2009]]
 
−
*[[CTSC:TTIC.072809| July 28, 2009]]
 
−
*[[CTSC:TTIC.072109| July 21, 2009]]
 
−
*[[CTSC:TTIC.071409| July 14, 2009]] Ware Conference room, Countway Library
 
−
*[[CTSC:TTIC.070709| July 7, 2009]]
 
−
*[[CTSC:TTIC.01to0609| t-con January to June]]
 
  
−
===2009 meetings===
+
==Past Events ==
  
−
*[[CTSC:XNAT strategy meeting.072309| XNAT strategy meetings, July 23]]  
+
===2011 meetings===
−
*[[CTSC:JIRA harmonization meetings.061109| JIRA harmonization meetings 4 of 4, June 11]]  
+
* [[CTSC:TTiC.092711| September 27, 2011]]
−
*[[CTSC:Catalyst deputies.052909| Harvard Catalyst Deputies Meeting, May 29]]
+
*[[CTSC:TTiC.091311| September 13, 2011]] face-to-face
−
*[[CTSC:JIRA harmonization meetings.051109| JIRA harmonization meetings 3 of 4, May 11]]  
+
*[[CTSC:TTiC.0802311| August 23, 2011]] meeting canceled
−
*[[CTSC:JIRA harmonization meetings.050409| JIRA harmonization meetings 1 and 2 of 4, April 28 and May 5]]  
+
*[[CTSC:TTiC.080911| August 09, 2011]] face-to-face
−
*[[CTSC:Catalyst deputies.042909| Harvard Catalyst Deputies Meeting, April 29]]
+
*[[CTSC:TTiC.072611| July 26, 2011]] t-con
−
*[[CTSC:IRAT/CTSA Joint workshop| IRAT/CTSA Joint workshop, March 29-31 (Baltimore)]]
+
*[[CTSC:TTiC.071211| July 12, 2011]] face-to-face
−
*[[CTSC:Catalyst informatics.032709| Creation of a web-based tracking tool for consultation requests, March 27]]
+
*[[CTSC:TTiC.062811| June 28, 2011]] t-con
−
*[[CTSC:Informatics.032709| PACS-i2b2-XNAT integration project, March 27]]
+
*[[CTSC:TTiC.061411| June 14, 2011]] face-to-face
−
*[[CTSC:Catalyst deputies.032409| Inaugural Harvard Catalyst Deputies Meeting, March 24]]
+
*[[CTSC:TTiC.052411| May 24, 2011]] face-to-face
−
*[[CTSC:BWH CTSA.031209| BWH imaging CTSA core meeting, March 12]]
+
*[[CTSC:TTiC.051011| May 10, 2011]] Meeting canceled
 +
*[[CTSC:TTiC.042611| April 26, 2011]]
 +
*[[CTSC:TTiC.041211| April 12, 2011]]
 +
*[[CTSC:TTIC.032211| March 22, 2011]]
 +
*[[CTSC:TTIC.030811| March 8, 2011]]
 +
*[[CTSC:TTIC.022211| February 22, 2011]]
 +
*[[CTSC:TTIC.020811| February 08, 2011]] Face-to-face
 +
*[[CTSC:TTIC.012511| January 25, 2011]] t-con
 +
*[[CTSC:TTIC.011111| January 11, 2011]] Face-to-face
  
−
===2009 courses and training===
+
===2010 ===
 +
*[[CTSC:TTIC.01to05| t-con 2010]]
 +
*[[CTSC:TTIC.RSNA2010| RSNA 2010]]
  
−
* Wednesday September 30, 2009 [[CTSC:ACRIN 09/30/09| Quantitative imaging workshop]] ACRIN fall meeting, Arlington, VA. Workshop in collaboration with Johns Hopkins University.
+
===2009 ===
−
* Monday July 20, 2009 3D Slicer 3.2 Hands-On Workshop, BWH Statistics and Research Lecture Series (Radiology residency program)
+
* [[CTSC:TTIC.2009|t-con, meetings and presentations 2009]]
−
* Thursday May 14, 2009 [[CTSC:Slicer cma.051409| 3D Slicer 3.2 Hands-On Workshop, MGH CMA Thursday May 14, 2009]]. This training has been canceled.
+
* [[CTSC:TTIC.progress|Progress Report Y2]]
−
* Wednesday June 3, 2009 Training on MRI compatible physiological monitoring system and Labchart Software. CHB
 
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* Tuesday and Wednesday March 4-5, 2009 Training on MRI compatible physiological monitoring system and Labchart Software. MIT, BWH, BIDMC, MGH
 
  
−
===2008 ===
+
===2008===
 
* [[CTSC:TTIC.2008|t-con and meetings 2008]]
 
* [[CTSC:TTIC.2008|t-con and meetings 2008]]
  
  
−
= JIRA system=
 
−
Here is a link to the [[media:JIRA_user.ppt |user guide]], [[media: JIRA_screens shots.ppt |screenshots]] and the [https://jira.cbmi.med.harvard.edu/jira/secure/Dashboard.jspa website]
 
  
 +
----
 +
 +
== JIRA system==
 +
We use JIRA to monitor our consultation requests. Here are some information for our consultants: links to the [[media:JIRA_user.ppt |user guide]], [[media: JIRA_screens shots.ppt |screenshots]] and the [https://jira.cbmi.med.harvard.edu/jira/secure/Dashboard.jspa website]
 +
 +
 +
 +
----
 +
 +
== External imaging core collaborative efforts ==
  
−
=MRI Compatible Physiological Monitoring System =
+
The Harvard Catalyst Imaging Consortium integrates with national clinical and translational efforts through the CTSA Imaging Working Group and Steering Committee
−
Here you can find [[CTSC:monitoring.system|Information for users]] about the specifications of the monitoring system. There are also informations about the LabChart software.
 
  
 +
*[http://wiki.ctsa-imaging.org/index.php?title=Main_Page CTSA Imaging Working Group wiki]
  
−
= Planning our Harvard-wide Medical Imaging Acquisition, Analysis, Visualization and Sharing =
 
−
[[CTSC:CrossSiteImagingIdeas|Use Cases and Development of Goals]]
 
  
 +
----
  
−
= External imaging core collaborative efforts =
+
== Additional Resources ==
−
*[[CTSC:RSNA| Radiological Society of North America (RSNA) led CTSC Imaging Core Activities]]
 
−
*[http://www.rsna.org/Research/ctsa.cfm RSNA CTSA webpresence]
 
−
*[http://wiki.ctsa-imaging.org/index.php?title=CTSA_-_Imaging_Informatics_Subgroup CTSA Imaging Informatics group wiki]
 
  
−
= Additional Resources =
+
{| class="wikitable1" border="1" cellpadding="5" border="1" align="center"
−
{| border="1"
 
 
|[[Image:BIRN-logo.jpg|160px]]
 
|[[Image:BIRN-logo.jpg|160px]]
−
|'''Biomedical Informatics Research Network'''
+
|'''Biomedical Informatics Research Network'''<br>BIRN
 
| [[CTSC:BIRNresources|BIRN Imaging Resources]]
 
| [[CTSC:BIRNresources|BIRN Imaging Resources]]
 
| [[CTSC:BIRN.Education|BIRN Training Resources]]
 
| [[CTSC:BIRN.Education|BIRN Training Resources]]
Line 158: Line 157:
 
| [http://nac.spl.harvard.edu Resources]
 
| [http://nac.spl.harvard.edu Resources]
 
| [http://nac.spl.harvard.edu/pages/Training Training Resources]
 
| [http://nac.spl.harvard.edu/pages/Training Training Resources]
 +
|}
 +
 +
 +
 +
----
 +
 +
The Harvard CTSC Imaging Consortium would like to thank its gracious host NA-MIC for providing communication tools to facilitate the rapid deployment of expertise in medical imaging acquisition, analysis and visualization to clinical translational investigators.
 +
 +
 +
Back to [[NA-MIC_External_Collaborations|NA-MIC External Collaborations]]

Latest revision as of 17:08, 14 December 2016

Home < Collaboration:Harvard CTSC

Harvard Catalyst | The Harvard Clinical and Translational Science Center, Imaging Consortium Workspace

Welcome to this on-line archive of current and past HMS affiliated medical imaging activity! The original intent of these wiki pages was to encourage quick and efficient communication among the Harvard Catalyst Imaging Consortium and the broader Harvard Catalyst community. However, changes in the structure of support for imaging in the Harvard Catalyst has resulted in new leadership and new offerings. Please visit the main web page for the current organization: Harvard Catalyst. This site is being maintained for archival purposes and also for support of the still active (mi2b2) project.

  • Catalyst logo final.jpg
  • NCRR-logo.jpg
  • Harvard shield.jpg

Mission statement

The Imaging Consortium:

  • provides expert consultation to assist clinical and translational investigators in the planning and design of medical imaging research.
  • educates about both general and current state of the art medical imaging and image processing capabilities. The courses are designed to better acquaint clinicians and scientists with the tools and technologies available in this important field.
  • guides the CTSC participants about available resources in the use of imaging as part of clinical translational research.
  • develops, through the Harvard Catalyst Medical Imaging Informatics Bench to Bedside Initiative (mi2b2) and cross-institutional harmonization efforts, medical imaging informatics to support the clinical and translational research community and enable current and future large-scale medical image data exploration.


Key Personnel

Sites Imaging Consortium Personnel
MGH.png Bruce Rosen, Director
Randy Gollub, Co-Director
Gordon J. Harris, Consultant
William Hanlon, Consultant
BIDMC.png Valerie Humblet, Medical Imaging Liaison
BWH.png Clare Tempany, Consultant
Ron Kikinis, Consultant
Charles Guttmann, Consultant
Todd Perlstein, Consultant
Gordon Williams, PI for CTSC Translational Technologies
Children's.png Stephan Voss, Consultant
Simon Warfield, Consultant
DFCI.png Annick D. Van den Abbeele,Consultant
Jeffrey Yap, Consultant and Director of Education


Upcoming Events

Multicenter Clinical Trial working group

The objective of this group is the establishment of an infrastructure to support multi-center imaging projects.


Harvard Catalyst Medical Imaging Informatics mi2b2 initiative

On September 24, 2009, Harvard Catalyst was awarded an ARRA administrative supplement to enable clinical imaging data to be used for secondary research purposes.


Medical Imaging Informatics and Data Management

Use Cases and Development of Goals


MRI Compatible Physiological Monitoring System

Here you can find Information for users about the specifications of a monitoring system supported by Harvard Catalyst. There is also information about the LabChart software.


Past Events

2011 meetings

2010

2009

2008


JIRA system

We use JIRA to monitor our consultation requests. Here are some information for our consultants: links to the user guide, screenshots and the website


External imaging core collaborative efforts

The Harvard Catalyst Imaging Consortium integrates with national clinical and translational efforts through the CTSA Imaging Working Group and Steering Committee


Additional Resources

BIRN-logo.jpg Biomedical Informatics Research Network
BIRN 		BIRN Imaging Resources BIRN Training Resources
NAMIC 380x463.jpg National Alliance for Medical Image Computing
NA-MIC 		NA-MIC Resources NA-MIC Training Resources
Logo nac.gif Neuroimage Analysis Center
NAC 		Resources Training Resources


The Harvard CTSC Imaging Consortium would like to thank its gracious host NA-MIC for providing communication tools to facilitate the rapid deployment of expertise in medical imaging acquisition, analysis and visualization to clinical translational investigators.


Back to NA-MIC External Collaborations

Retrieved from "https://www.na-mic.org/w/index.php?title=Collaboration:Harvard_CTSC&oldid=94025"