Difference between revisions of "2014 Summer Project Week"
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__NOTOC__ | __NOTOC__ | ||
+ | Back to [[Events]] | ||
[[image:PW-MIT2014.png|300px]] | [[image:PW-MIT2014.png|300px]] | ||
+ | =Welcome to the web page for the 19th Project Week!= | ||
− | + | [[image:Projectweek-2014-06-23-IMG 0837.JPG|800px|opening session]] | |
− | + | [[image:Projectweek-19.5.JPG|800px|opening session]] | |
+ | ==Summary== | ||
+ | The most recent project week was the 19th event in the series. It was held June 23-27, 2014 at MIT. It recorded 81 registered attendees, who worked on 66 projects. These attendees represented 21 academic sites (Brigham and Women’s Hospital, Massachusetts General Hospital, MIT, WPI, University of Utah, University of Iowa, University of Michigan, University of North Carolina at Chapel Hill, Queen’s University, University of Sydney, University Magna Graecia of Catanzaro, Old Dominion University, University of CA San Diego, Johns Hopkins University, Stony Brook University, University of Washington, NIH, Seattle Children's Research Institute, University College Cork, Ben-Gurion University, Princess Margaret Cancer Centre) and 4 companies (GE Global Research, Kitware, Fraunhofer MEVIS, Isomics Inc). | ||
+ | A [[Project_Events#Past_Project_Weeks|summary]] of all past Project Events. | ||
+ | ==Logistics== | ||
+ | *Dates: June 23-27, 2014. | ||
+ | *Location: MIT, Cambridge, MA. | ||
==Agenda== | ==Agenda== | ||
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{|border="1" | {|border="1" | ||
|-style="background:#b0d5e6;color:#02186f" | |-style="background:#b0d5e6;color:#02186f" | ||
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− | |bgcolor="#dbdbdb"|'''Project Presentations''' | + | |bgcolor="#dbdbdb"|'''Project Presentations''' |
|bgcolor="#6494ec"|'''NA-MIC Update Day''' | |bgcolor="#6494ec"|'''NA-MIC Update Day''' | ||
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|bgcolor="#ffffaa"|Breakfast | |bgcolor="#ffffaa"|Breakfast | ||
|bgcolor="#ffffaa"|Breakfast | |bgcolor="#ffffaa"|Breakfast | ||
− | |bgcolor="#ffffaa"|Breakfast | + | |bgcolor="#ffffaa"|Breakfast (Stata Building 4th Floor R&D Common Dining Area) |
|- | |- | ||
|bgcolor="#ffffdd"|'''9am-12pm''' | |bgcolor="#ffffdd"|'''9am-12pm''' | ||
| | | | ||
− | |'''10-11: | + | |'''10-11:30am''' <font color="#503020">Breakout Session:'''</font><br>[[2014 Project Week Breakout Session: DICOM|DICOM]] (Steve Pieper) |
− | [[MIT_Project_Week_Rooms| | + | [[MIT_Project_Week_Rooms#Star|Star]] |
| | | | ||
− | | | + | '''11am-12noon''' Breakout Session: [[2014_Project_Week_Breakout_Session: Slicer for users| Slicer for users]] (Ron Kikinis) |
− | '''9:00-10:30am''' [[2014_Tutorial_Contest|Tutorial Contest Presentations (Sonia Pujol)]] <br> | + | <br> |
+ | |'''9:00-10:30am''' [[2014_Tutorial_Contest|Tutorial Contest Presentations (Sonia Pujol)]] <br> | ||
[[MIT_Project_Week_Rooms#Grier_34-401_AB|Grier Rooms]] | [[MIT_Project_Week_Rooms#Grier_34-401_AB|Grier Rooms]] | ||
<br>----------------------------------------<br> | <br>----------------------------------------<br> | ||
'''10am-12pm: <font color="#4020ff">Breakout Session:'''</font><br>[[2014 Project Week Breakout Session: IGT Neuro|Image-Guided Therapy - Neurosurgery]] (Alexandra Golby, Tina Kapur) <br> | '''10am-12pm: <font color="#4020ff">Breakout Session:'''</font><br>[[2014 Project Week Breakout Session: IGT Neuro|Image-Guided Therapy - Neurosurgery]] (Alexandra Golby, Tina Kapur) <br> | ||
[[MIT_Project_Week_Rooms#Star|Star]] | [[MIT_Project_Week_Rooms#Star|Star]] | ||
− | |'''10am-12pm:''' [[#Projects|Project Progress Updates]] <br> | + | |'''10am-12pm:''' [[#Projects|Project Progress Updates]] (Stata Building 4th Floor R&D Common Dining Area) |
+ | <br>----------------------------------------<br> | ||
'''12pm''' [[Events:TutorialContestJune2014|Tutorial Contest Winner Announcement]] | '''12pm''' [[Events:TutorialContestJune2014|Tutorial Contest Winner Announcement]] | ||
− | + | (Stata Building 4th Floor R&D Common Dining Area) | |
+ | |||
|- | |- | ||
|bgcolor="#ffffdd"|'''12pm-1pm''' | |bgcolor="#ffffdd"|'''12pm-1pm''' | ||
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The event itself starts off with a short presentation by each project team, driven using their previously created description, and allows all participants to be acquainted with others who are doing similar work. In the rest of the week, about half the time is spent in breakout discussions on topics of common interest of subsets of the attendees, and the other half is spent in project teams, doing hands-on programming, algorithm design, or clinical application of NA-MIC kit tools. The hands-on activities are done in 10-20 small teams of size 3-5, each with a mix of experts in NA-MIC kit software, algorithms, and clinical. To facilitate this work, a large room is setup with several tables, with internet and power access, and each team gathers on a table with their individual laptops, connects to the internet to download their software and data, and is able to work on their projects. On the last day of the event, a closing presentation session is held in which each project team presents a summary of what they accomplished during the week. | The event itself starts off with a short presentation by each project team, driven using their previously created description, and allows all participants to be acquainted with others who are doing similar work. In the rest of the week, about half the time is spent in breakout discussions on topics of common interest of subsets of the attendees, and the other half is spent in project teams, doing hands-on programming, algorithm design, or clinical application of NA-MIC kit tools. The hands-on activities are done in 10-20 small teams of size 3-5, each with a mix of experts in NA-MIC kit software, algorithms, and clinical. To facilitate this work, a large room is setup with several tables, with internet and power access, and each team gathers on a table with their individual laptops, connects to the internet to download their software and data, and is able to work on their projects. On the last day of the event, a closing presentation session is held in which each project team presents a summary of what they accomplished during the week. | ||
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Please make sure that you are on the [http://public.kitware.com/mailman/listinfo/na-mic-project-week na-mic-project-week mailing list] | Please make sure that you are on the [http://public.kitware.com/mailman/listinfo/na-mic-project-week na-mic-project-week mailing list] | ||
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* [[2014_Project_Week_Template | Template for project pages]] | * [[2014_Project_Week_Template | Template for project pages]] | ||
− | == | + | ==Image-Guided Therapy== |
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− | + | * [[2014_Summer_Project_Week:SlicerIGT|SlicerIGT extension: testing, tutorials, website]] (Tamas Ungi, Nobuhiko Hata, Tina Kapur) | |
+ | * [[2014_Summer_Project_Week:Robot_Control_With_OpenIGTLink | Robot Control With OpenIGTLink]] ( Gregory Fischer WPI, Nirav Patel WPI, Nobuhiko Hata BWH) | ||
+ | *[[2014_Summer_Project_Week:Visual_Guidance_for_Neurosurgery_US_Recording |Visual Guidance for Neurosurgery US Data Recording | ||
+ | ]] (Alireza, Isaiah, Rahul, Matthew, Tina, Steve, Sandy, Alex Golby) | ||
+ | * [[Gestural Point of Care Interface for IGT]] (Saskia, Franklin, Steve, Tobias, Andras) | ||
+ | * [[2014_Summer_Project_Week:Intelligent_Steering | Steered Image Registration using Intelligent Interfaces for Minimal User Interaction]] (Marcel Prastawa, Jim Miller, Steve Pieper) | ||
+ | * [[2014_Summer_Project_Week:CBC_3D_I2MConversion | CBC 3D I2M Conversion ]] (Fotis Drakopoulos, Yixun Liu, Andrey Fedorov, Ron Kikinis, Nikos Chrisochoides) | ||
+ | * [[2014_Summer_Project_Week:An ITK implementation of Physics-Based Non-Rigid Registration method for Brain Shift | An ITK Implementation of Physics-Based Non-Rigid Registration Method for Brain Shift]] (Fotis Drakopoulos, Yixun Liu, Andriy Kot, Andrey Fedorov, Olivier Clatz, Ron Kikinis, Nikos Chrisochoides) | ||
+ | * [[2014_Summer_Project_Week:Open_source_electromagnetic_trackers_usingOpenIGTLink| Open-source Electromagnetic Trackers using OpenIGTLink]] (Peter Traneus Anderson, Tina Kapur, Sonia Pujol) | ||
+ | *[[2014_Summer_Project_Week:Intraoperative_Registration_of_preoperative_CT_and_C-arm_CT_of_the_lung | Intraoperative Registration of Preoperative CT and C-arm CT of the Lung]] (Katharina Breininger, Jay Jagadeesan) | ||
+ | *[[2014_Summer_Project_Week:Image guided neuroendoscope | Making Realistic Clinical Story Board for Image-guided Skull Base Endoscopic Surgery]] (Keryn Palmer, Nobuhiko Hata) | ||
+ | *[[2014_Summer_Project_Week:PathExplorer_Extension | PathExplorer Extension (code refactoring, documentation, tutorial)]] (Laurent Chauvin, Tamas Ungi, Nobuhiko Hata) | ||
+ | *[[2014_Summer_Project_Week:MR-Ultrasound_Registration_for_Prostate_Interventions | MR-Ultrasound Registration for Prostate Interventions]] (Andriy Fedorov, Chenxi Zhang, Andras Lasso) | ||
+ | *[[2014_Summer_Project_Week:Surface_approximation_from_contour_points | Surface Approximation from Contour Points]] (Chenxi Zhang, Csaba Pinter, Andrey Fedorov) | ||
+ | *[[2014_Summer_Project_Week:Cortical_Dysplasia_Identification | Tools for Dysplasia Identification in Epilepsy]] (Luiz Murta; Emylin Souza; Tina Kapur; Ron Kikinis) | ||
+ | *[[2014_Summer_Project_Week:Focused_Ultrasound_Pressure_Sensor| Focused Ultrasound Pressure Sensor ]] (Robin Kouver, Nassim Alikacem) | ||
+ | *[[2014_Summer_Project_Week:Focused_Ultrasound_Positioner| Focused Ultrasound Positioner ]] (Nassim Alikacem, Robin Kouver) | ||
+ | *[[2014_Summer_Project_Week:Software_Platform_for_Robotic_Surgery|Searching for Software Platform for Robotic Surgery]] (Yangming Li) | ||
+ | *[[2014_Summer_Project_Week:mipiX | Rapid Visualization of Large Image Collections]] (Adrian, Ramesh, Polina) | ||
+ | *[[2014_Summer_Project_Week:Ventriculostomy_Guidance_Transcranial_Ultrasound |Ventriculostomy Guidance with Transcranial Ultrasound | ||
+ | ]] (Jason White, Kirby Vosburgh, Can Meral, Alex Golby) | ||
+ | *[[2014_Summer_Project_Week:EM-tracked_prostate_US_calibration_with_Plus|Calibration of EM-tracked US Acquisition using Plus]] (Andrey Fedorov, Tamas Ungi, Andras Lasso, Jay Jagadeesan) | ||
==Huntington's Disease== | ==Huntington's Disease== | ||
*[[2014_Summer_Project_Week:FiberTractDispersion| Fiber Tract Dispersion and UKF Tractography]] (Peter Savadjiev, Yogesh Rathi, Hans Johnson, C-F Westin) | *[[2014_Summer_Project_Week:FiberTractDispersion| Fiber Tract Dispersion and UKF Tractography]] (Peter Savadjiev, Yogesh Rathi, Hans Johnson, C-F Westin) | ||
+ | *[[2014_Summer_Project_Week:LongitudinalSeg| 4D Segmentation for Longitudinal Consistency ]] (Regina Kim, James Fishbaugh, Guido Gerig, Hans Johnson) | ||
+ | *[[2014_Summer_Project_Week:AutomatedSegmentationQA | Automated Prior-driven Segmentation QA]] (Dave Welch, Hans Johnson) | ||
+ | *[[2014_Summer_Project_Week:ManualSegmentationQA | Manual Segmentation QA]] (Dave Welch, Hans Johnson) | ||
+ | *[[2014_Summer_Project_Week:UpdateBRAINSTools | Update BRAINSTools (BRAINSFit and DWIConvert) in Slicer]] (Hans Johnson, Dave Welch, Kent Williams, JC, Brad) | ||
+ | *[[2014_Summer_Prioject_Week:AgatstonScoring | Cardiac Agatston Scoring Extension]] (Jessica Forbes, Hans Johnson) | ||
− | == | + | ==TBI== |
− | *[[2014_Summer_Project_Week: | + | *[[2014_Summer_Project_Week:TBI_Segmentation| Interactive Segmentation for Traumatic Brain Injury ]] (Bo Wang, Marcel Prastawa, Andrei Irimia, John D. Van Horn, Guido Gerig) |
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− | == | + | ==Stroke== |
− | + | *[[2014_Summer_Project_Week:Stroke-ImagingGenetics | Stroke Imaging Genetics]] (Adrian Dalca, Ramesh Sridharan, Polina Golland) | |
− | *[[2014_Summer_Project_Week: | + | *[[2014_Summer_Project_Week:Stroke-SuperResolution | Stroke Super Resolution]] (Adrian Dalca, Ramesh Sridharan, Polina Golland) |
− | *[[2014_Summer_Project_Week: | ||
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==Cardiac== | ==Cardiac== | ||
+ | *[[2014_Summer_Project_Week:Cardiac-Congenital | MRI Segmentation for Congenital Heart Disease]] (Danielle Pace, Adrian Dalca, Polina Golland) | ||
− | == | + | ==Chronic Obstructive Pulmonary Disease, Lung, Chest == |
− | |||
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+ | *[[2014_Summer_Project_Week: Pectoralis muscle segmentation| Pectoralis Muscle Segmentation]] (Rola Harmouche, James Ross, Raul San Jose) | ||
+ | *[[2014_Summer_Project_Week:Image_Registration_with_Sliding_Motion_Constraints | Image Registration with Sliding Motion Constraints]] (Alexander Derksen, Kanglin Chen, Gregory Sharp) | ||
+ | *[[2014_Summer_Project_Week:Multiscale_Non_Local_Means_filter_(NLM)_for_chest_CT_images | Multiscale Non Local Means Filter (NLM) for chest CT images]] (Pietro Nardelli, Raul San Jose) | ||
− | == | + | ==Head and Neck Cancer / Radiotherapy == |
+ | *[[2014_Summer_Project_Week:SlicerRT scalarbar vtk6 migration| ScalarBar vtk6 Migration]] (Kevin Wang, Nicole) | ||
+ | *[[2014_Summer_Project_Week:Upload_HN_data| Upload H&N data]] (Greg Sharp, Paolo Zaffino) | ||
+ | *[[2014_Summer_Project_Week:DIR_stop_and_restart| DIR Stop and Restart]] (Paolo Zaffino, Greg Sharp, Steve Pieper) | ||
+ | *[[2014_Summer_Project_Week:Proton_pencil_beam| Proton Pencil Beam Dose Calculation]] (Maxime Desplanques, Kevin Wang, Greg Sharp) | ||
− | == | + | ==[http://qiicr.org QIICR]== |
+ | * [[2014_Summer_Project_Week: RWV mapping support|Real World Value Mapping Support]] (Ethan, Andrey, Andras, Steve, Jim) | ||
+ | * [[2014_Summer_Project_Week: CLI Derived DICOM Data| Proper Formatting of DICOM Derived Data from CLI]] (Steve, Andrey, Jim, {Michael and David remotely}) | ||
+ | * [[2014_Summer_Project_Week: DICOM SEG Conversion to Support Archival of QIN Grand Challenges Results|DICOM SEG Conversion to Support Archival of QIN Grand Challenges Results]] (Jayashree, Andrey, Steve, {David remotely}) | ||
+ | * [[2014_Summer_Project_Week: ColorBar support|Color Bar Support for Slice Views]] (Alireza, Andrey, Steve, Kevin) | ||
+ | * [[2014_Summer_Project_Week: Slicer DICOM|Slicer DICOM Improvements]] (Alireza, Andrey, Steve, Ron) | ||
− | + | ==Feature Extraction== | |
− | + | *[[2014_Summer_Project_Week:Tumor_DCE-MRI_Segmentation | Breast Tumor Segmentation]] (Vivek Narayan, Jay Jagadeesan) | |
− | *[[2014_Summer_Project_Week: | + | *[[2014_Summer_Project_Week:Tumor_Heterogeneity_Analysis | Breast Tumor Heterogeneity Analysis]] (Vivek Narayan, Jay Jagadeesan) |
− | *[[2014_Summer_Project_Week: | + | *[[2014_Summer_Project_Week: Quantitative image feature extraction | Quantitative Image Feature Extraction in Non-Small Cell Lung Cancer]] (Hugo Aerts) |
− | * [[2014_Summer_Project_Week: | + | *[[2014_Summer_Project_Week:Invariant_Feature_Extraction_Slicer | Invariant Feature Methods in Slicer]] (Matthew Toews, Nicole Aucoin, Hans Johnson, Sandy Wells) |
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− | * [[2014_Summer_Project_Week: | ||
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− | == | + | ==Additional Brain Image Analysis== |
− | *[[2014_Summer_Project_Week: | + | *[[2014_Summer_Project_Week:Slicer_Murin_Shape_Analysis | Shape Analysis for the Developing Murine Skull]] (Murat Maga, Ryan Young, Seattle Chidren's Hospital). |
− | *[[2014_Summer_Project_Week: | + | *[[2014_Summer_Project_Week:Slicer_LDDMM_Shape_Analysis | Slicer Interface to LDDMM Shape Anlaysis]] (Saurabh Jain, JHU; Steve Pieper, Isomics; Josh Cates, SCI, Utah; Hans Johnson, Iowa; Martin Styner, UNC) |
+ | *[[2014_Summer_Project_Week:Atlas Selection | Atlas Selection]] (Kanglin Chen, Gregory Sharp) | ||
+ | *[[2014_Summer_Project_Week:CAD_Toolbox_for_Neurological_Disorders | CAD Toolbox for Neurological Disorders]] (Sidong Liu, Siqi Liu, Fan Zhang, Yang Song, Weidong Cai, Sonia Pujol, Ron Kikinis) | ||
+ | *[[2014_Summer_Project_Week:Longitudinal_patient_specific_DTI_analysis | Longitudinal Patient-specific DTI Analysis using Slicer for Neonatal Asphyxia]] (Anuja Sharma, SCI, Utah; Francois Budin, UNC; Martin Styner, UNC; Guido Gerig, SCI, Utah) | ||
+ | *[[2014_Summer_Project_Week:Pipeline_Visualization | Pipeline Visualization]] (Ramesh, Adrian, Polina) | ||
− | == | + | ==Slicer4 Extensions== |
− | *[[2014_Summer_Project_Week: | + | *[[2014_Summer_Project_Week:Multidim Data| Multidimensional Data]] (Andras Lasso, Kevin Wang) |
+ | *[[2014_Summer_Project_Week:DICOM-SRO import/export| DICOM-SRO import/export]] (Kevin Wang, Greg Sharp) | ||
+ | *[[2014_Summer_Project_Week:DRAMMS_Slicer| Integrating DRAMMS Deformable Registration into Slicer]] (Yangming Ou, Steve Pieper, Andriy Fedorov, Tina Kapur, Christos Davatzikos, Ron Kikinis, Randy Gollub, Jayashree Kalpathy-Cramer) | ||
− | == | + | ==TMJOA RO1 - Collaboration with NAMIC== |
− | * [[2014_Summer_Project_Week: | + | *[[2014_Summer_Project_Week:TMJOA| TMJOA]] (Francois Budin, Beatriz Paniagua, Lucia Cevidanes, Nicole Aucoin, Steve Pieper, Jean-Christophe Fillion-Robin, Alex Yarmarkovich) |
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==Infrastructure== | ==Infrastructure== | ||
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* [[2014_Summer_Project_Week: Chronicle| Chronicle]] (Steve) | * [[2014_Summer_Project_Week: Chronicle| Chronicle]] (Steve) | ||
+ | * [[2014_Summer_Project_Week: Factory and Testing Process Post NA-MIC| Post NA-MIC Factory and Testing]] (Steve, Jc, Ron) | ||
* [[2014_Summer_Project_Week: Volume Registration|Volume Registration]] (Steve, Greg, Marcel, Jim) | * [[2014_Summer_Project_Week: Volume Registration|Volume Registration]] (Steve, Greg, Marcel, Jim) | ||
* [[2014_Summer_Project_Week:Markups | Markups]] (Nicole Aucoin) | * [[2014_Summer_Project_Week:Markups | Markups]] (Nicole Aucoin) | ||
− | *[[2014_Summer_Project_Week:Pluggable Label Statistics |Pluggable Label Statistics]] (Andrey , Ethan, Steve, Brad, Jim | + | *[[2014_Summer_Project_Week:Pluggable Label Statistics |Pluggable Label Statistics]] (Andrey , Ethan, Steve, Brad, Jim) |
− | *[[2014_Summer_Project_Week:Subject_hierarchy_integration | Subject | + | *[[2014_Summer_Project_Week:Subject_hierarchy_integration | Subject Hierarchy Integration]] (Csaba, Steve, Jc, Andras) |
− | *[[2014_Summer_Project_Week:Contours | Contours]] (Adam Rankin, Csaba, Andras, Steve, Jc | + | *[[2014_Summer_Project_Week:Contours | Contours]] (Adam Rankin, Csaba, Andras, Steve, Jc) |
− | *[[2014_Summer_Project_Week:Parameter Node Serialization | Parameter Node Serialization]] (Kevin Wang | + | *[[2014_Summer_Project_Week:Parameter Node Serialization | Parameter Node Serialization]] (Kevin Wang, Steve, Jim, Jc, Matt, Nicole) |
− | *[[2014_Summer_Project_Week:Self-tests for non-linear transforms | Self-tests for | + | *[[2014_Summer_Project_Week:Self-tests for non-linear transforms | Self-tests for Non-linear Transforms]] (Xining Du) |
− | + | *[[2014_Summer_Project_Week:Slicer Tutorial Updates | Slicer Tutorial Updates]] (Parth Amin, Farukh Kohistan, Sonia Pujol) | |
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− | *[[2014_Summer_Project_Week: | ||
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== '''Logistics''' == | == '''Logistics''' == | ||
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*'''Room sharing''': If interested, add your name to the list: [[2014_Summer_Project_Week/RoomSharing|here]] | *'''Room sharing''': If interested, add your name to the list: [[2014_Summer_Project_Week/RoomSharing|here]] | ||
− | == | + | ==Registrants== |
Do not add your name to this list - it is maintained by the organizers based on your paid registration. ([https://www.regonline.com/namic2014summerprojectweek Please click here to register.]) | Do not add your name to this list - it is maintained by the organizers based on your paid registration. ([https://www.regonline.com/namic2014summerprojectweek Please click here to register.]) | ||
− | #Hugo Aerts | + | # Hugo Aerts :: Dana Farber Cancer Institute :: hugo_aerts at dfci.harvard.edu |
− | #Nassim Alikacem | + | # Nassim Alikacem :: Brigham and Women's Hospital :: Nassim.Alikacem at gmail.com |
− | #Peter Anderson | + | # Parth Amin :: Wentworth Institute of Technology :: aminp at wit.edu |
− | #Nicole Aucoin | + | # Peter Anderson :: Retired :: traneus at verizon.net |
− | #Eva Breininger | + | # Nicole Aucoin :: Brigham and Women's Hospital :: nicole at bwh.harvard.edu |
− | #Francois Budin | + | # Eva Breininger :: Brigham and Women's Hospital :: ebreininger at partners.org |
− | #Saskia Camps | + | # Francois Budin :: University of North Carolina :: fbudin at unc.edu |
− | #Lucia Cevidanes | + | # Saskia Camps :: Brigham and Women's Hospital :: saskiacamps at gmail.com |
− | #Laurent Chauvin | + | # Lucia Cevidanes :: University of Michigan :: luciacev at umich.edu |
− | #Kanglin Chen | + | # Laurent Chauvin :: Brigham and Women's Hospital :: lchauvin at bwh.harvard.edu |
− | #Adrian Dalca | + | # Kanglin Chen :: Fraunhofer MEVIS, Bremen :: kanglin.chen at mevis.fraunhofer.de |
− | #Alexander Derksen | + | # Adrian Dalca :: Massachusetts Institute of Technology :: adalca at MIT.EDU |
− | #Maxime Desplanques | + | # Alexander Derksen :: Fraunhofer MEVIS, Bremen :: alexander.derksen at mevis.fraunhofer.de |
− | #Fotis Drakopoulos | + | # Maxime Desplanques :: Massachusetts General Hospital :: maxime.desplanques at cnao.it |
− | #Sneha Durgapal | + | # Fotis Drakopoulos :: Old Dominion University :: fdrakopo at gmail.com |
− | #Andriy Fedorov | + | # Sneha Durgapal :: Brigham and Women's Hospital :: durgapalsneha at gmail.com |
− | #Jean-Christophe Fillion-Robin | + | # Andriy Fedorov :: Brigham and Women's Hospital :: fedorov at bwh.harvard.edu |
− | #James Fishbaugh | + | # Jean-Christophe Fillion-Robin :: Kitware, Inc. :: jchris.fillionr at kitware.com |
− | #Jessica Forbes | + | # James Fishbaugh :: University of Utah :: jfishbau at sci.utah.edu |
− | #Polina Golland | + | # Jessica Forbes :: University of Iowa :: jessica-forbes at uiowa.edu |
− | #Jeffrey Grethe | + | # Polina Golland :: Massachusetts Institute of Technology :: polina at csail.mit.edu |
− | #Rola Harmouche | + | # Jeffrey Grethe :: UCSD :: jgrethe at ncmir.ucsd.edu |
− | #Nobuhiko Hata | + | # Rola Harmouche :: Brigham and Women's Hospital :: rolaharmouche at gmail.com |
− | #Saurabh Jain | + | # Nobuhiko Hata :: Brigham and Women's Hospital :: hata at bwh.harvard.edu |
− | #Hans Johnson | + | # Jayender Jagadeesan :: Brigham and Women's Hospital :: jayender at bwh.harvard.edu |
− | #Jayashree Kalpathy-Cramer | + | # Saurabh Jain :: Johns Hopkins University :: saurabh at cis.jhu.edu |
− | #Tina Kapur | + | # Hans Johnson :: University of Iowa :: hans-johnson at uiowa.edu |
− | #Ron Kikinis | + | # Jayashree Kalpathy-Cramer :: Massachusetts General Hospital :: kalpathy at nmr.mgh.harvard.edu |
− | #Regina Kim | + | # Tina Kapur :: Brigham and Women's Hospital :: tkapur at bwh.harvard.edu |
− | #Franklin King | + | # Ron Kikinis :: Brigham and Women's Hospital :: kikinis at bwh.harvard.edu |
− | #Tassilo Klein | + | # Eun Young Regina Kim :: University of Iowa :: eunyoung-kim at uiowa.edu |
− | #Farukh Kohistani | + | # Franklin King :: Queen's University :: franklin.king at queensu.ca |
− | #Robin Kouver | + | # Tassilo Klein :: Brigham and Women's Hospital :: TJKlein at bwh.harvard.edu |
− | # | + | # Farukh Kohistani :: Brigham and Women's Hospital :: kohistan at bc.edu |
− | #Yangming Li | + | # Ivan Kolesov :: Stony Brook University :: ivan.kolesov1 at gmail.com |
− | #Sidong Liu | + | # Robin Kouver :: Brigham and Women's Hospital :: r.kouver at gmail.com |
− | #Siqi Liu | + | # Andras Lasso :: Queen's University :: lasso at queensu.ca |
− | #Bradley Lowekamp | + | # Yangming Li :: University of Washington :: ymli81 at uw.edu |
− | #Murat Maga | + | # Sidong Liu :: University of Sydney :: sliu at bwh.harvard.edu |
− | #Katie Mastrogiacomo | + | # Siqi Liu :: University of Sydney :: sliu4512 at uni.sydney.edu.au |
− | #Alireza Mehrtash | + | # Bradley Lowekamp :: National Library of Medicine :: blowekamp at mail.nih.gov |
− | #Dominik Meier | + | # Murat Maga :: Seattle Children's Research Institute :: maga at uw.edu |
− | # | + | # Katie Mastrogiacomo :: Brigham and Women's Hospital :: kmast at bwh.harvard.edu |
− | #Luiz Otavio Murta | + | # Alireza Mehrtash :: Brigham and Women's Hospital :: mehrtash at bwh.harvard.edu |
− | #Vivek Narayan | + | # Dominik Meier :: Brigham and Women's Hospital :: meier at bwh.harvard.edu |
− | #Pietro Nardelli | + | # James Miller :: General Electric :: millerjv at ge.com |
− | #Yangming Ou | + | # Luiz Otavio Murta :: Brigham and Women's Hospital :: lmurta at partners.org |
− | #Danielle Pace | + | # Vivek Narayan :: Brigham and Women's Hospital :: narayan.vivek9 at gmail.com |
− | #Keryn Palmer | + | # Pietro Nardelli :: University College Cork :: pietro at bwh.harvard.edu |
− | #Nirav Patel | + | # Isaiah Norton :: Brigham and Women's Hospital :: isaiah.norton at gmail.com |
− | #Tobias Penzkofer | + | # Jorge Onieva :: Brigham and Women's Hospital :: jorgeonieva at gmail.com |
− | #Steve Pieper, | + | # Yangming Ou :: Massachusetts General Hospital :: yangming.ou at uphs.upenn.edu |
− | #Csaba Pinter | + | # Danielle Pace :: Massachusetts Institute of Technology :: dfpace at mit.edu |
− | #Marcel Prastawa | + | # Keryn Palmer :: Brigham and Women's Hospital :: kpalmer5 at partners.org |
− | #Somia Pujol | + | # Nirav Patel :: Worcester Polytechnic Institute :: napatel at wpi.edu |
− | #Adam Rankin | + | # Tobias Penzkofer :: Brigham and Women's Hospital :: pt at bwh.harvard.edu |
− | #Aymeric Reshef | + | # Steve Pieper :: Isomics, Inc. :: pieper at isomics.com |
− | #Rahul Sastry | + | # Csaba Pinter :: Queen's University :: csaba.pinter at queensu.ca |
− | #Peter Savadjiev | + | # Marcel Prastawa :: General Electric :: marcel.prastawa at ge.com |
− | #Gregory Sharp | + | # Somia Pujol :: Brigham and Women's Hospital :: spujol at bwh.harvard.edu |
− | #Emylin Sousa | + | # Adam Rankin :: Queen's University :: rankin at queensu.ca |
− | #Ramesh Sridharan | + | # Aymeric Reshef :: Brigham and Women's Hospital :: areshef at bwh.harvard.edu |
− | #Matthew Toews | + | # Tammy Riklin Raviv :: Ben-Gurion University :: rrtammy at ee.bgu.ac.il |
− | #Ethan Ulrich | + | # Rahul Sastry :: Brigham and Women's Hospital :: rahul_sastry at hms.harvard.edu |
− | #Tamas Ungi | + | # Peter Savadjiev :: Brigham and Women's Hospital :: petersv at bwh.harvard.edu |
− | #Kevin Wang | + | # Gregory Sharp :: Massachusetts General Hospital :: gcsharp at mgh.harvard.edu |
− | #David Welch | + | # Emylin Sousa :: Brigham and Women's Hospital :: emylin.sousa at gmail.com |
− | # | + | # Ramesh Sridharan :: Massachusetts Institute of Technology :: rameshvs at csail.mit.edu |
− | # | + | # Clare Tempany :: Brigham and Women's Hospital :: ctempany at bwh.harvard.edu |
− | # | + | # Matthew Toews :: Brigham and Women's Hospital :: mt at bwh.harvard.edu |
− | #Ryan Young | + | # Ethan Ulrich :: University of Iowa :: ethan-ulrich at uiowa.edu |
− | #Paolo Zaffino | + | # Tamas Ungi :: Queen's University :: ungi at queensu.ca |
− | #Chenxi Zhang | + | # Kevin Wang :: Princess Margaret Cancer Centre :: kevin.wang at rmp.uhn.ca |
− | #Fan Zhang | + | # David Welch :: University of Iowa :: david-welch at uiowa.edu |
+ | # Sandy Wells :: Brigham and Women's Hospital :: sw at bwh.harvard.edu | ||
+ | # Jason White :: Brigham and Women's Hospital :: white at bwh.harvard.edu | ||
+ | # Alexander Yarmarkovich :: Isomics, Inc. :: alexy at bwh.harvard.edu | ||
+ | # Ryan Young :: Seattle Children's Research Institute :: ryan.young at seattlechildrens.org | ||
+ | # Paolo Zaffino :: Magna Græcia University of Catanzaro :: p.zaffino at unicz.it | ||
+ | # Chenxi Zhang :: Brigham and Women's Hospital :: chenxizhang at fudan.edu.cn | ||
+ | # Fan Zhang :: University of Sydney :: fzha8048 at uni.sydney.edu.au |
Latest revision as of 12:14, 30 June 2017
Home < 2014 Summer Project WeekBack to Events
Welcome to the web page for the 19th Project Week!
Summary
The most recent project week was the 19th event in the series. It was held June 23-27, 2014 at MIT. It recorded 81 registered attendees, who worked on 66 projects. These attendees represented 21 academic sites (Brigham and Women’s Hospital, Massachusetts General Hospital, MIT, WPI, University of Utah, University of Iowa, University of Michigan, University of North Carolina at Chapel Hill, Queen’s University, University of Sydney, University Magna Graecia of Catanzaro, Old Dominion University, University of CA San Diego, Johns Hopkins University, Stony Brook University, University of Washington, NIH, Seattle Children's Research Institute, University College Cork, Ben-Gurion University, Princess Margaret Cancer Centre) and 4 companies (GE Global Research, Kitware, Fraunhofer MEVIS, Isomics Inc).
A summary of all past Project Events.
Logistics
- Dates: June 23-27, 2014.
- Location: MIT, Cambridge, MA.
Agenda
Time | Monday, June 23 | Tuesday, June 24 | Wednesday, June 25 | Thursday, June 26 | Friday, June 27 |
---|---|---|---|---|---|
Project Presentations | NA-MIC Update Day | IGT Day | Reporting Day | ||
8:30am | Breakfast | Breakfast | Breakfast | Breakfast (Stata Building 4th Floor R&D Common Dining Area) | |
9am-12pm | 10-11:30am Breakout Session: DICOM (Steve Pieper) |
11am-12noon Breakout Session: Slicer for users (Ron Kikinis)
|
9:00-10:30am Tutorial Contest Presentations (Sonia Pujol) Grier Rooms
|
10am-12pm: Project Progress Updates (Stata Building 4th Floor R&D Common Dining Area)
| |
12pm-1pm | Lunch | Lunch | Lunch | Lunch | Lunch boxes; Adjourn by 1:30pm |
1pm-5:30pm | 1-1:05pm: Ron Kikinis: Welcome
Grier Rooms
|
1-3pm: Breakout Session: QIICR (Andrey Fedorov) |
1-2:30pm: Breakout Session: Contours (Adam Rankin, Csaba Pinter) |
1-3pm: Breakout Session: Image-Guided Therapy - Prostate Interventions (Clare Tempany, Noby Hata) Star
|
|
5:30pm | Adjourn for the day | Adjourn for the day | Adjourn for the day | Adjourn for the day |
Background
Project Week is a hands on activity -- programming using the open source NA-MIC Kit, algorithm design, and clinical application -- that has become one of the major events in the NA-MIC, NCIGT, and NAC calendars. It is held in the summer at MIT, typically the last week of June, and a shorter version is held in Salt Lake City in the winter, typically the second week of January.
Active preparation begins 6-8 weeks prior to the meeting, when a kick-off teleconference is hosted by the NA-MIC Engineering, Dissemination, and Leadership teams, the primary hosts of this event. Invitations to this call are sent to all NA-MIC members, past attendees of the event, as well as any parties who have expressed an interest in working with NA-MIC. The main goal of the kick-off call is to get an idea of which groups/projects will be active at the upcoming event, and to ensure that there is sufficient NA-MIC coverage for all. Subsequent teleconferences allow the hosts to finalize the project teams, consolidate any common components, and identify topics that should be discussed in breakout sessions. In the final days leading upto the meeting, all project teams are asked to fill in a template page on this wiki that describes the objectives and plan of their projects.
The event itself starts off with a short presentation by each project team, driven using their previously created description, and allows all participants to be acquainted with others who are doing similar work. In the rest of the week, about half the time is spent in breakout discussions on topics of common interest of subsets of the attendees, and the other half is spent in project teams, doing hands-on programming, algorithm design, or clinical application of NA-MIC kit tools. The hands-on activities are done in 10-20 small teams of size 3-5, each with a mix of experts in NA-MIC kit software, algorithms, and clinical. To facilitate this work, a large room is setup with several tables, with internet and power access, and each team gathers on a table with their individual laptops, connects to the internet to download their software and data, and is able to work on their projects. On the last day of the event, a closing presentation session is held in which each project team presents a summary of what they accomplished during the week.
Please make sure that you are on the na-mic-project-week mailing list
Projects
Image-Guided Therapy
- SlicerIGT extension: testing, tutorials, website (Tamas Ungi, Nobuhiko Hata, Tina Kapur)
- Robot Control With OpenIGTLink ( Gregory Fischer WPI, Nirav Patel WPI, Nobuhiko Hata BWH)
- Visual Guidance for Neurosurgery US Data Recording (Alireza, Isaiah, Rahul, Matthew, Tina, Steve, Sandy, Alex Golby)
- Gestural Point of Care Interface for IGT (Saskia, Franklin, Steve, Tobias, Andras)
- Steered Image Registration using Intelligent Interfaces for Minimal User Interaction (Marcel Prastawa, Jim Miller, Steve Pieper)
- CBC 3D I2M Conversion (Fotis Drakopoulos, Yixun Liu, Andrey Fedorov, Ron Kikinis, Nikos Chrisochoides)
- An ITK Implementation of Physics-Based Non-Rigid Registration Method for Brain Shift (Fotis Drakopoulos, Yixun Liu, Andriy Kot, Andrey Fedorov, Olivier Clatz, Ron Kikinis, Nikos Chrisochoides)
- Open-source Electromagnetic Trackers using OpenIGTLink (Peter Traneus Anderson, Tina Kapur, Sonia Pujol)
- Intraoperative Registration of Preoperative CT and C-arm CT of the Lung (Katharina Breininger, Jay Jagadeesan)
- Making Realistic Clinical Story Board for Image-guided Skull Base Endoscopic Surgery (Keryn Palmer, Nobuhiko Hata)
- PathExplorer Extension (code refactoring, documentation, tutorial) (Laurent Chauvin, Tamas Ungi, Nobuhiko Hata)
- MR-Ultrasound Registration for Prostate Interventions (Andriy Fedorov, Chenxi Zhang, Andras Lasso)
- Surface Approximation from Contour Points (Chenxi Zhang, Csaba Pinter, Andrey Fedorov)
- Tools for Dysplasia Identification in Epilepsy (Luiz Murta; Emylin Souza; Tina Kapur; Ron Kikinis)
- Focused Ultrasound Pressure Sensor (Robin Kouver, Nassim Alikacem)
- Focused Ultrasound Positioner (Nassim Alikacem, Robin Kouver)
- Searching for Software Platform for Robotic Surgery (Yangming Li)
- Rapid Visualization of Large Image Collections (Adrian, Ramesh, Polina)
- Ventriculostomy Guidance with Transcranial Ultrasound (Jason White, Kirby Vosburgh, Can Meral, Alex Golby)
- Calibration of EM-tracked US Acquisition using Plus (Andrey Fedorov, Tamas Ungi, Andras Lasso, Jay Jagadeesan)
Huntington's Disease
- Fiber Tract Dispersion and UKF Tractography (Peter Savadjiev, Yogesh Rathi, Hans Johnson, C-F Westin)
- 4D Segmentation for Longitudinal Consistency (Regina Kim, James Fishbaugh, Guido Gerig, Hans Johnson)
- Automated Prior-driven Segmentation QA (Dave Welch, Hans Johnson)
- Manual Segmentation QA (Dave Welch, Hans Johnson)
- Update BRAINSTools (BRAINSFit and DWIConvert) in Slicer (Hans Johnson, Dave Welch, Kent Williams, JC, Brad)
- Cardiac Agatston Scoring Extension (Jessica Forbes, Hans Johnson)
TBI
- Interactive Segmentation for Traumatic Brain Injury (Bo Wang, Marcel Prastawa, Andrei Irimia, John D. Van Horn, Guido Gerig)
Stroke
- Stroke Imaging Genetics (Adrian Dalca, Ramesh Sridharan, Polina Golland)
- Stroke Super Resolution (Adrian Dalca, Ramesh Sridharan, Polina Golland)
Cardiac
- MRI Segmentation for Congenital Heart Disease (Danielle Pace, Adrian Dalca, Polina Golland)
Chronic Obstructive Pulmonary Disease, Lung, Chest
- Pectoralis Muscle Segmentation (Rola Harmouche, James Ross, Raul San Jose)
- Image Registration with Sliding Motion Constraints (Alexander Derksen, Kanglin Chen, Gregory Sharp)
- Multiscale Non Local Means Filter (NLM) for chest CT images (Pietro Nardelli, Raul San Jose)
Head and Neck Cancer / Radiotherapy
- ScalarBar vtk6 Migration (Kevin Wang, Nicole)
- Upload H&N data (Greg Sharp, Paolo Zaffino)
- DIR Stop and Restart (Paolo Zaffino, Greg Sharp, Steve Pieper)
- Proton Pencil Beam Dose Calculation (Maxime Desplanques, Kevin Wang, Greg Sharp)
QIICR
- Real World Value Mapping Support (Ethan, Andrey, Andras, Steve, Jim)
- Proper Formatting of DICOM Derived Data from CLI (Steve, Andrey, Jim, {Michael and David remotely})
- DICOM SEG Conversion to Support Archival of QIN Grand Challenges Results (Jayashree, Andrey, Steve, {David remotely})
- Color Bar Support for Slice Views (Alireza, Andrey, Steve, Kevin)
- Slicer DICOM Improvements (Alireza, Andrey, Steve, Ron)
Feature Extraction
- Breast Tumor Segmentation (Vivek Narayan, Jay Jagadeesan)
- Breast Tumor Heterogeneity Analysis (Vivek Narayan, Jay Jagadeesan)
- Quantitative Image Feature Extraction in Non-Small Cell Lung Cancer (Hugo Aerts)
- Invariant Feature Methods in Slicer (Matthew Toews, Nicole Aucoin, Hans Johnson, Sandy Wells)
Additional Brain Image Analysis
- Shape Analysis for the Developing Murine Skull (Murat Maga, Ryan Young, Seattle Chidren's Hospital).
- Slicer Interface to LDDMM Shape Anlaysis (Saurabh Jain, JHU; Steve Pieper, Isomics; Josh Cates, SCI, Utah; Hans Johnson, Iowa; Martin Styner, UNC)
- Atlas Selection (Kanglin Chen, Gregory Sharp)
- CAD Toolbox for Neurological Disorders (Sidong Liu, Siqi Liu, Fan Zhang, Yang Song, Weidong Cai, Sonia Pujol, Ron Kikinis)
- Longitudinal Patient-specific DTI Analysis using Slicer for Neonatal Asphyxia (Anuja Sharma, SCI, Utah; Francois Budin, UNC; Martin Styner, UNC; Guido Gerig, SCI, Utah)
- Pipeline Visualization (Ramesh, Adrian, Polina)
Slicer4 Extensions
- Multidimensional Data (Andras Lasso, Kevin Wang)
- DICOM-SRO import/export (Kevin Wang, Greg Sharp)
- Integrating DRAMMS Deformable Registration into Slicer (Yangming Ou, Steve Pieper, Andriy Fedorov, Tina Kapur, Christos Davatzikos, Ron Kikinis, Randy Gollub, Jayashree Kalpathy-Cramer)
TMJOA RO1 - Collaboration with NAMIC
- TMJOA (Francois Budin, Beatriz Paniagua, Lucia Cevidanes, Nicole Aucoin, Steve Pieper, Jean-Christophe Fillion-Robin, Alex Yarmarkovich)
Infrastructure
- Chronicle (Steve)
- Post NA-MIC Factory and Testing (Steve, Jc, Ron)
- Volume Registration (Steve, Greg, Marcel, Jim)
- Markups (Nicole Aucoin)
- Pluggable Label Statistics (Andrey , Ethan, Steve, Brad, Jim)
- Subject Hierarchy Integration (Csaba, Steve, Jc, Andras)
- Contours (Adam Rankin, Csaba, Andras, Steve, Jc)
- Parameter Node Serialization (Kevin Wang, Steve, Jim, Jc, Matt, Nicole)
- Self-tests for Non-linear Transforms (Xining Du)
- Slicer Tutorial Updates (Parth Amin, Farukh Kohistan, Sonia Pujol)
Logistics
- Dates: June 23-27, 2014.
- Location: Stata Center / RLE MIT.
- REGISTRATION: https://www.regonline.com/namic2014summerprojectweek. Please note that as you proceed to the checkout portion of the registration process, RegOnline will offer you a chance to opt into a free trial of ACTIVEAdvantage -- click on "No thanks" in order to finish your Project Week registration.
- Registration Fee: $300.
- Hotel: Similar to previous years, no rooms have been blocked in a particular hotel.
- Room sharing: If interested, add your name to the list: here
Registrants
Do not add your name to this list - it is maintained by the organizers based on your paid registration. (Please click here to register.)
- Hugo Aerts :: Dana Farber Cancer Institute :: hugo_aerts at dfci.harvard.edu
- Nassim Alikacem :: Brigham and Women's Hospital :: Nassim.Alikacem at gmail.com
- Parth Amin :: Wentworth Institute of Technology :: aminp at wit.edu
- Peter Anderson :: Retired :: traneus at verizon.net
- Nicole Aucoin :: Brigham and Women's Hospital :: nicole at bwh.harvard.edu
- Eva Breininger :: Brigham and Women's Hospital :: ebreininger at partners.org
- Francois Budin :: University of North Carolina :: fbudin at unc.edu
- Saskia Camps :: Brigham and Women's Hospital :: saskiacamps at gmail.com
- Lucia Cevidanes :: University of Michigan :: luciacev at umich.edu
- Laurent Chauvin :: Brigham and Women's Hospital :: lchauvin at bwh.harvard.edu
- Kanglin Chen :: Fraunhofer MEVIS, Bremen :: kanglin.chen at mevis.fraunhofer.de
- Adrian Dalca :: Massachusetts Institute of Technology :: adalca at MIT.EDU
- Alexander Derksen :: Fraunhofer MEVIS, Bremen :: alexander.derksen at mevis.fraunhofer.de
- Maxime Desplanques :: Massachusetts General Hospital :: maxime.desplanques at cnao.it
- Fotis Drakopoulos :: Old Dominion University :: fdrakopo at gmail.com
- Sneha Durgapal :: Brigham and Women's Hospital :: durgapalsneha at gmail.com
- Andriy Fedorov :: Brigham and Women's Hospital :: fedorov at bwh.harvard.edu
- Jean-Christophe Fillion-Robin :: Kitware, Inc. :: jchris.fillionr at kitware.com
- James Fishbaugh :: University of Utah :: jfishbau at sci.utah.edu
- Jessica Forbes :: University of Iowa :: jessica-forbes at uiowa.edu
- Polina Golland :: Massachusetts Institute of Technology :: polina at csail.mit.edu
- Jeffrey Grethe :: UCSD :: jgrethe at ncmir.ucsd.edu
- Rola Harmouche :: Brigham and Women's Hospital :: rolaharmouche at gmail.com
- Nobuhiko Hata :: Brigham and Women's Hospital :: hata at bwh.harvard.edu
- Jayender Jagadeesan :: Brigham and Women's Hospital :: jayender at bwh.harvard.edu
- Saurabh Jain :: Johns Hopkins University :: saurabh at cis.jhu.edu
- Hans Johnson :: University of Iowa :: hans-johnson at uiowa.edu
- Jayashree Kalpathy-Cramer :: Massachusetts General Hospital :: kalpathy at nmr.mgh.harvard.edu
- Tina Kapur :: Brigham and Women's Hospital :: tkapur at bwh.harvard.edu
- Ron Kikinis :: Brigham and Women's Hospital :: kikinis at bwh.harvard.edu
- Eun Young Regina Kim :: University of Iowa :: eunyoung-kim at uiowa.edu
- Franklin King :: Queen's University :: franklin.king at queensu.ca
- Tassilo Klein :: Brigham and Women's Hospital :: TJKlein at bwh.harvard.edu
- Farukh Kohistani :: Brigham and Women's Hospital :: kohistan at bc.edu
- Ivan Kolesov :: Stony Brook University :: ivan.kolesov1 at gmail.com
- Robin Kouver :: Brigham and Women's Hospital :: r.kouver at gmail.com
- Andras Lasso :: Queen's University :: lasso at queensu.ca
- Yangming Li :: University of Washington :: ymli81 at uw.edu
- Sidong Liu :: University of Sydney :: sliu at bwh.harvard.edu
- Siqi Liu :: University of Sydney :: sliu4512 at uni.sydney.edu.au
- Bradley Lowekamp :: National Library of Medicine :: blowekamp at mail.nih.gov
- Murat Maga :: Seattle Children's Research Institute :: maga at uw.edu
- Katie Mastrogiacomo :: Brigham and Women's Hospital :: kmast at bwh.harvard.edu
- Alireza Mehrtash :: Brigham and Women's Hospital :: mehrtash at bwh.harvard.edu
- Dominik Meier :: Brigham and Women's Hospital :: meier at bwh.harvard.edu
- James Miller :: General Electric :: millerjv at ge.com
- Luiz Otavio Murta :: Brigham and Women's Hospital :: lmurta at partners.org
- Vivek Narayan :: Brigham and Women's Hospital :: narayan.vivek9 at gmail.com
- Pietro Nardelli :: University College Cork :: pietro at bwh.harvard.edu
- Isaiah Norton :: Brigham and Women's Hospital :: isaiah.norton at gmail.com
- Jorge Onieva :: Brigham and Women's Hospital :: jorgeonieva at gmail.com
- Yangming Ou :: Massachusetts General Hospital :: yangming.ou at uphs.upenn.edu
- Danielle Pace :: Massachusetts Institute of Technology :: dfpace at mit.edu
- Keryn Palmer :: Brigham and Women's Hospital :: kpalmer5 at partners.org
- Nirav Patel :: Worcester Polytechnic Institute :: napatel at wpi.edu
- Tobias Penzkofer :: Brigham and Women's Hospital :: pt at bwh.harvard.edu
- Steve Pieper :: Isomics, Inc. :: pieper at isomics.com
- Csaba Pinter :: Queen's University :: csaba.pinter at queensu.ca
- Marcel Prastawa :: General Electric :: marcel.prastawa at ge.com
- Somia Pujol :: Brigham and Women's Hospital :: spujol at bwh.harvard.edu
- Adam Rankin :: Queen's University :: rankin at queensu.ca
- Aymeric Reshef :: Brigham and Women's Hospital :: areshef at bwh.harvard.edu
- Tammy Riklin Raviv :: Ben-Gurion University :: rrtammy at ee.bgu.ac.il
- Rahul Sastry :: Brigham and Women's Hospital :: rahul_sastry at hms.harvard.edu
- Peter Savadjiev :: Brigham and Women's Hospital :: petersv at bwh.harvard.edu
- Gregory Sharp :: Massachusetts General Hospital :: gcsharp at mgh.harvard.edu
- Emylin Sousa :: Brigham and Women's Hospital :: emylin.sousa at gmail.com
- Ramesh Sridharan :: Massachusetts Institute of Technology :: rameshvs at csail.mit.edu
- Clare Tempany :: Brigham and Women's Hospital :: ctempany at bwh.harvard.edu
- Matthew Toews :: Brigham and Women's Hospital :: mt at bwh.harvard.edu
- Ethan Ulrich :: University of Iowa :: ethan-ulrich at uiowa.edu
- Tamas Ungi :: Queen's University :: ungi at queensu.ca
- Kevin Wang :: Princess Margaret Cancer Centre :: kevin.wang at rmp.uhn.ca
- David Welch :: University of Iowa :: david-welch at uiowa.edu
- Sandy Wells :: Brigham and Women's Hospital :: sw at bwh.harvard.edu
- Jason White :: Brigham and Women's Hospital :: white at bwh.harvard.edu
- Alexander Yarmarkovich :: Isomics, Inc. :: alexy at bwh.harvard.edu
- Ryan Young :: Seattle Children's Research Institute :: ryan.young at seattlechildrens.org
- Paolo Zaffino :: Magna Græcia University of Catanzaro :: p.zaffino at unicz.it
- Chenxi Zhang :: Brigham and Women's Hospital :: chenxizhang at fudan.edu.cn
- Fan Zhang :: University of Sydney :: fzha8048 at uni.sydney.edu.au